Gene
| Gene Model ID | pfu_aug2.0_1080.1_01366 |
|---|---|
| Locus | scaffold1080.1 : 19614 ... 61565 : - |
| To GenomeBrowser | scaffold1080.1:19614..61565 |
| Genes list of scaffold | scaffold1080.1 |
| Synonym | pfu_aug1.0_1694.1_08065 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1080.1_01366.t1 | 1 | 1 | Methyltransf_21 | 1221 | 1390 | 1.1e-14 | 54.7 | 1.7e-18 | 2.5e-14 | 53.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1080.1_01366.t1 | gi|676456864|ref|XP_009054461.1| | hypothetical protein LOTGIDRAFT_232244 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1080.1_01366.t1 | gi|260808725|ref|XP_002599157.1| | hypothetical protein BRAFLDRAFT_68766 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1080.1_01366.t1 | gi|699237520|ref|XP_009862308.1| | PREDICTED: E3 ubiquitin-protein ligase RNF213-like [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_1080.1_01366.t1 | gi|594081182|ref|XP_006064216.1| | PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF213-like [Bubalus bubalis] | 0.0 |
| pfu_aug2.0_1080.1_01366.t1 | gi|548356595|ref|XP_005730423.1| | PREDICTED: E3 ubiquitin-protein ligase RNF213-like [Pundamilia nyererei] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1080.1_01366.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1080.1_01366.t1 atgctgtctaaaaagatacaggaagtcacaagcaaggaatcggagaacctgttggtatcagacctttgcaaaataagttc caaaatggaaaatatcactgttgatgtgtatcagccctctgtaaagtactttcaggacgtactatcagaggaaagcatag cgaaactacaagggcttaaaacaagtatggattccgtaacattcaacaaaatagttgatagaactgcagataaattgcag gaaaatatgggatccaacaaaaggctatctgttgaaagcgtgattgtagacatttgggtggttgcaaaaaatgagttagg ttgtcttaaggatcgtgtaaacagtgcatcttggacagtttccgacgctcaaaaatattttgacaagatggacatcgaga aggtgagagcagagttgaagaaaatggtagatgtatataccacacaatggatgacagcaagaatttctgagttggagaaa taccgtttgctgaagaatgcgtctgcagttgttctagtccttcttaaacttcaaaagacgtatggtttagagggagattt cagagatctggaaacgattacaaagtcgatgaacaatccagaaacaaagataaaagatatcaacatgtctgcagtaaaca gaagtaaagagctacaagagatcgacgaaaaaaagctgaaatgtcttgagacattcgattcgtgtgcgcctctagtcaaa tggatacagaaagaattcacaaatggtttagaggacctgaaaacgtttgtagatttagctttgatatcagccggggaagg agacatcaagatcgacaaagtactttgtcttcagacctcagttgtggtgtatgctcctttaatatttgaacaaaagaaag aaaagaaaagtggaactggccttttactcgagaaatgtcagagtgtttgggataatcttaaaaataatccaaaggcccct gcaaaactgagcgacacaagaagggatctggaatggtttcaatctgtgaagagagctcacggcgaggtacaggtatctgc acttcacgaagcagaagccataaacgaaagaggttacttccgcattggaaacataggacagaaagatatacgacaaggag gacagttgatgttgtcggacataattgaattgagcgtaccccctggagacaaagggagagggaaaggaacacattcagac aaggtgaaaaactacacctttgaagaactgacagaacttcaaagtaggatgatgctcgttgccggaaggaaatcagatac ccatgtatctgaaagcatgctgtcatcttccatttcaagacgaaaaactgagaaagatttggcacaagaaagcatgaaca aattcacaatggtatttgataacatcattcgccttgctgagacatacacccgtctatggtctgcaggttgcatccttttc aaaatatggagtgcagacattttctgcagcgcaagctccaaaataggcatccgtgtaaccttcggggctggaaagaaaga ggaagtttacgaaggaaataaggacaagggtgatatttttcacttgatttcaaaactttctattttcatgcagcattgtt tagatctttggatgcagtatattaaagaaaaaagagatgaattcttccatctgaatttctacactatggatcagattgtt attcttcagaaagaactttccaatcaagatggaaaagaaccatcaaacactctttatccgctattgaagctagtgaacgg aatttgttcgaaaacagatgtggatactgcaaaacgaaaggttcaaacaaagattgatgaagagaattcaaaacagaagc ttcagaacgttcaagatgccgaaacgaggtcgagtggtgaatcacaagaagacaaagaaaaaagaatcttcattgaaaag ctagtgaaaagtggaatatcaaagaatcttgccatgattgctttgttacatggaggaattaagccaacagaaccaaacaa aggtaaaatttggtgtatgcaaaacaaaggcaaagaaagtgatcttacgctcaacagtgttgggaaaagaggaaaggctg aggacatatctgatctatgggttgtcagatctgatcagggttcaacagcatcagagacaaatgaattgtttgaaaaaatg gagacactttggaactctttcctgtcagctgtagcatctagtgtcagtgattttctgagcattgagcatgtggcaaagat tttagaggaactctttaaagaccagacgtttgaatgtattctttcggtgtatctacaaaatgagagttctttgccaaagg aagatgaaatactgctttgcacactatcaacaactgaagaacaagtggatgttttcttgcgacgagccctctcaaaaaga cacgaagttggtaaaatatactgtcttgtgaatccggagcagatgaagtttgaaatcgtggaaaaggcagattgtcttct aacggagtatgttaaacaggcacatggagacgaataccgccttgttgtcatttgcaacgaagagacggaatacagatcat caataacatcatctcttgaaagatatagagtaccagccttcatacctattgagaaaaatgatctgttaaatcgcatcaag agccaacttaagataaaggaggaatctcattcgtcgacaaattctgcagcacaaatagacattgaacaatcgacagttcg agttgtgacctcaagaagagcaggtactggaaaaagtctattctgtaaaagatatgtggcaaaaatgagagagaaacaag ctggcagtttgggtgacaacattaccatacgtctgcagcacagaaaagtcgacgtcaatgcttttattgacaaactccta aaacatactatgccaccaggagaggaacatccgagaattattcacatcgacatatcatatgataacattgaagagtatgt cggccgatctatggtcctagcaaggctcgaacaaacaaccttaagattactcgcccgacgccttatccgcaagaccacgg caccaacaaaacttgttccatgttttatgaaattctgtgcaatggttgcagaggaggtgtcgaaaatgttaaaggtttac gacggtctacggacggacggtcgatggacggcacgctatgacaaaagctcagaagaaatagaaattgaccaccaagatcg gcagccgtatttcatcgacagtgatttgttttcgcatacttctatacaaaactgtttattgcaggagtatcgggatgagt atgaaatcattaaacttcttccaagaatttcatgcaggtcgccaagagaagcactttctgctttcaaagatacgtcggca atggatgttttatttgaccagagaataatgcataaaacagatggaagagatggatatgttacaatatggaccaataataa tatggaaagttacacggactgccgcttaaataaatctatagtgagagataaagtgaaatatagtcttactgacagtgtta atcatgacaaactgattctttttggatataaagactgggatactatatccaggaagataaaactaaatggacattttgaa ccacaaatagatcgcattatccatttcatcctcagtaaaaatccggctgccatttttctcgatgttggagcaaatatagg aataaggtctctgcaagtagctaaaaggggaatcatagttgtggccgtagaagctcttactttaaatgttgctcattttt gtgaatcaatatatgcaaatggattagaaaataaaataactattgttcggaatgctttagctgaaaggcgacaatttgtg aggatgggtaagttcagaaactctatgggagccagtttcgttgcggacgacaaggatgtgatgagcgcgaggaaagggag tataatggggacctttgatgaaaatattaaagcaataacatttgatgaccttttgcaagtcagttctataaaggatagcg ataagattgttataaagcttgacattgaaggatacgaagcgcatgctttgaaaggtgcatcagatttttttaccattaaa gatatagttgccgttgtgatggaatggagatggcacagaggacagaacagtgccaaagacattttttcgttttttgacag acaccatttcaatgtttacagtttcaatttgaaaggtagaatcacagaagaactaaaatttggaccttcttctggatcaa attggcccgaggatgttgtttggataaagcgaagatacatagatagcattcttttttaa |
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Protein
| Protein ID | pfu_aug2.0_1080.1_01366.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1080.1_01366.t1 MLSKKIQEVTSKESENLLVSDLCKISSKMENITVDVYQPSVKYFQDVLSEESIAKLQGLKTSMDSVTFNKIVDRTADKLQ ENMGSNKRLSVESVIVDIWVVAKNELGCLKDRVNSASWTVSDAQKYFDKMDIEKVRAELKKMVDVYTTQWMTARISELEK YRLLKNASAVVLVLLKLQKTYGLEGDFRDLETITKSMNNPETKIKDINMSAVNRSKELQEIDEKKLKCLETFDSCAPLVK WIQKEFTNGLEDLKTFVDLALISAGEGDIKIDKVLCLQTSVVVYAPLIFEQKKEKKSGTGLLLEKCQSVWDNLKNNPKAP AKLSDTRRDLEWFQSVKRAHGEVQVSALHEAEAINERGYFRIGNIGQKDIRQGGQLMLSDIIELSVPPGDKGRGKGTHSD KVKNYTFEELTELQSRMMLVAGRKSDTHVSESMLSSSISRRKTEKDLAQESMNKFTMVFDNIIRLAETYTRLWSAGCILF KIWSADIFCSASSKIGIRVTFGAGKKEEVYEGNKDKGDIFHLISKLSIFMQHCLDLWMQYIKEKRDEFFHLNFYTMDQIV ILQKELSNQDGKEPSNTLYPLLKLVNGICSKTDVDTAKRKVQTKIDEENSKQKLQNVQDAETRSSGESQEDKEKRIFIEK LVKSGISKNLAMIALLHGGIKPTEPNKGKIWCMQNKGKESDLTLNSVGKRGKAEDISDLWVVRSDQGSTASETNELFEKM ETLWNSFLSAVASSVSDFLSIEHVAKILEELFKDQTFECILSVYLQNESSLPKEDEILLCTLSTTEEQVDVFLRRALSKR HEVGKIYCLVNPEQMKFEIVEKADCLLTEYVKQAHGDEYRLVVICNEETEYRSSITSSLERYRVPAFIPIEKNDLLNRIK SQLKIKEESHSSTNSAAQIDIEQSTVRVVTSRRAGTGKSLFCKRYVAKMREKQAGSLGDNITIRLQHRKVDVNAFIDKLL KHTMPPGEEHPRIIHIDISYDNIEEYVGRSMVLARLEQTTLRLLARRLIRKTTAPTKLVPCFMKFCAMVAEEVSKMLKVY DGLRTDGRWTARYDKSSEEIEIDHQDRQPYFIDSDLFSHTSIQNCLLQEYRDEYEIIKLLPRISCRSPREALSAFKDTSA MDVLFDQRIMHKTDGRDGYVTIWTNNNMESYTDCRLNKSIVRDKVKYSLTDSVNHDKLILFGYKDWDTISRKIKLNGHFE PQIDRIIHFILSKNPAAIFLDVGANIGIRSLQVAKRGIIVVAVEALTLNVAHFCESIYANGLENKITIVRNALAERRQFV RMGKFRNSMGASFVADDKDVMSARKGSIMGTFDENIKAITFDDLLQVSSIKDSDKIVIKLDIEGYEAHALKGASDFFTIK DIVAVVMEWRWHRGQNSAKDIFSFFDRHHFNVYSFNLKGRITEELKFGPSSGSNWPEDVVWIKRRYIDSILF |
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