Gene
| Gene Model ID | pfu_aug2.0_1080.1_01371 |
|---|---|
| Locus | scaffold1080.1 : 155789 ... 166805 : - |
| To GenomeBrowser | scaffold1080.1:155789..166805 |
| Genes list of scaffold | scaffold1080.1 |
| Synonym | pfu_aug1.0_5481.1_02015 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| methylenetetrahydrofolate reductase | GO:0004489 GO:0005829 GO:0006555 GO:0035999 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1080.1_01371.t1 | 1 | 1 | MTHFR | 40 | 331 | 0.0 | 374.0 | 0.0 | 0.0 | 373.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1080.1_01371.t1 | gi|524901855|ref|XP_005107331.1| | PREDICTED: methylenetetrahydrofolate reductase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1080.1_01371.t1 | gi|597768305|ref|XP_007247987.1| | PREDICTED: methylenetetrahydrofolate reductase [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_1080.1_01371.t1 | gi|742116382|ref|XP_010873847.1| | PREDICTED: methylenetetrahydrofolate reductase [Esox lucius] | 0.0 |
| pfu_aug2.0_1080.1_01371.t1 | gi|676454264|ref|XP_009053624.1| | hypothetical protein LOTGIDRAFT_214878 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1080.1_01371.t1 | gi|260841256|ref|XP_002613844.1| | hypothetical protein BRAFLDRAFT_262151 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1080.1_01371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1080.1_01371.t1 atgccagagttagtgaccaatgttgtggtcaatggccatgataaggagaccacgcccccttcacccccacccacaggtga cacggattacggacagtacatcccactatcacaacgaatacagagacgaatcctgtccagtgatcattggttctcgctgg agttcttccctccccgcacagtcaacggagctgtcaatcttataagcaggtttgagcgtatgaatgagggaggtccgtta ttctgtgacatcacatggcatccggctggtgaccccggtaacacacagaaacctacgagctccacgtgtatggccggcac catgctgaattactgtggtgtagagacgatgttacacgtaacgtgctgcggacagagtcctggacaaatcaaagaaaatc tcaaaaaagccaaagaattaggcatcagaaacttgttagctctgaggggagatcctccagatggcaacgagacttggacg taccagaaaggtggattaaactacgctacagatctggtcaagctgatcagagaggaatatggcgaccacttcaccatctg tgtggcaggatatcccacaggtcatccagaatgctcgtcgtacgctgatgatctccgacatcttaaagcaaaagtagatg caggagctgactttattattactcaattgttcttcaaagcagatactttccttaaatttgtaaaagactgtcgtagcata ggaattaaatgtcctataatcccgggaatattacccattcaggcataccagtcattgcgtcacattgtaaagctctccag attggaggttccccaagaaatacttgacgctattactccgatcaaagacaatgacgaggccataagaaactttggtgttg accaagctgtcgacatggcaaaggaactctttatgtcagaggaggtgaaaggactacatttctacacactgaacagagaa gtggccacgatcgaaattcttaaaagaatcggcatgtggtgtgaagaaccggcaaaaccattgccatggaaacagactgc taaccacacccgatcaaaagaagatgtcagacctatattctggcgatgtcggccaaaaagttacgtacataggacatcaa attgggacgaatttccgaacggacgatggggcaattcttcagcagcctcttttggtgacataaaagactattacttgttt tatctgaagagtaagagaagcaaggaagatcatttgaagatgtggggtgaagaattgacttgtgaagaagacgtgtggga tgtgttttatgcatacatagcaaacttaccaaacaaacatggtgttaaggtgctagagatgccgtggaacgatgatgagt tatccccagagaccagcatgatcacggagaaactggcagcaatcaataaacgtggtgtactcactataaactcacaaccc tccatcaacggtgctccgtcctccgacatgaaagtcgggtggggggcacctaatggatacatctaccaaaaggcctatct ggaattctttgtttcaccaagaaatgtccaagccttgaaaatcatcctgaaggactatccattagtgaattatcacatcg taaactataatggcaatatggactacacaaactgtgatgtatctacaccgattgccgtaacctggggagtattccccggc aaggagatcatccagccgacagtggtggatcccatcgcgttcaagacatggaagttcaagccctttcacttatccaagcc cattgaggttaggttacaaagtcaacatggtcaaggtcntcaactcagtggaactgaagagcagatggaaactaacggaa actcggtggaaaccaatggagagatttgtggttga |
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Protein
| Protein ID | pfu_aug2.0_1080.1_01371.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1080.1_01371.t1 MPELVTNVVVNGHDKETTPPSPPPTGDTDYGQYIPLSQRIQRRILSSDHWFSLEFFPPRTVNGAVNLISRFERMNEGGPL FCDITWHPAGDPGNTQKPTSSTCMAGTMLNYCGVETMLHVTCCGQSPGQIKENLKKAKELGIRNLLALRGDPPDGNETWT YQKGGLNYATDLVKLIREEYGDHFTICVAGYPTGHPECSSYADDLRHLKAKVDAGADFIITQLFFKADTFLKFVKDCRSI GIKCPIIPGILPIQAYQSLRHIVKLSRLEVPQEILDAITPIKDNDEAIRNFGVDQAVDMAKELFMSEEVKGLHFYTLNRE VATIEILKRIGMWCEEPAKPLPWKQTANHTRSKEDVRPIFWRCRPKSYVHRTSNWDEFPNGRWGNSSAASFGDIKDYYLF YLKSKRSKEDHLKMWGEELTCEEDVWDVFYAYIANLPNKHGVKVLEMPWNDDELSPETSMITEKLAAINKRGVLTINSQP SINGAPSSDMKVGWGAPNGYIYQKAYLEFFVSPRNVQALKIILKDYPLVNYHIVNYNGNMDYTNCDVSTPIAVTWGVFPG KEIIQPTVVDPIAFKTWKFKPFHLSKPIEVRLQSQHGQGXQLSGTEEQMETNGNSVETNGEICG |
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