Gene
| Gene Model ID | pfu_aug2.0_1080.1_01372 |
|---|---|
| Locus | scaffold1080.1 : 169977 ... 173405 : - |
| To GenomeBrowser | scaffold1080.1:169977..173405 |
| Genes list of scaffold | scaffold1080.1 |
| Synonym | pfu_aug1.0_5481.1_02016 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glyoxylate reductase hydroxypyruvate reductase-like | GO:0000166 GO:0008152 GO:0016616 GO:0044699 GO:0050662 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1080.1_01372.t1 | 1 | 1 | 2-Hacid_dh | 6 | 312 | 2.0e-27 | 95.2 | 9.2e-31 | 2.3e-27 | 95.0 |
| pfu_aug2.0_1080.1_01372.t1 | 2 | 1 | AdoHcyase_NAD | 55 | 93 | 5.0e-06 | 26.4 | 1.3 | 3200.0 | -2.2 |
| pfu_aug2.0_1080.1_01372.t1 | 1 | 1 | 2-Hacid_dh_C | 111 | 288 | 0.0 | 193.1 | 0.0 | 0.0 | 192.4 |
| pfu_aug2.0_1080.1_01372.t1 | 2 | 2 | AdoHcyase_NAD | 148 | 237 | 5.0e-06 | 26.4 | 6.5e-09 | 1.6e-05 | 24.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1080.1_01372.t1 | gi|676475472|ref|XP_009060485.1| | hypothetical protein LOTGIDRAFT_234402 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1080.1_01372.t1 | gi|742208790|ref|XP_010895739.1| | PREDICTED: glyoxylate reductase/hydroxypyruvate reductase-like [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1080.1_01372.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1080.1_01372.t1 atgtccggggcaaatatttatgtgaccagagccattcccgaggaggctaagtctttactgaggggcgtggcccagatatc tatatgggacaatgaggacgccgtcccccgggaggaactattaaagggtgtggttggggttcaaggaattttctgcacca tcagtgacgttatagataaagaggtgcttgactctgcaggtagcaatctccgtatcgtggctacaatgtcggtgggtaag gaccacatcgacctgattgagtgctcgaggagaggggtttacgtggctaataccccggatatagccgctgacagcgccgc tgatttggctgtggcgctagtactcatggcaacacggagggtgatagaaggtgtggatgcagtgaggaagggtcaatggg aaggatggaaacccacatggctgtgcggcacaagtcttatgaacaagactttgggaattctcggatttggtcgtgttggc ttcggaatagctcgccgtctgaagccattcggaatccataaggtcatttataatgatattcaggaagtggagtacgcctt ggactttgccgaattcgtttccttcgatgagcttcttgcacaatcggacatcctctgcatttgctgttctctgacctctt tgacaaggaatatgtttaccaagagtgaatttaaaaagatgaagaactccgctgtgctcataaatacctcacgtggtccc atcgtaaaccatgtggacttgactgaagctttaaaggagggtgacatagcttcggcaggtcttgacgtcaccgatcccga gccacttccggttgatcatcctctgacgtcacttcctaactgcgtcatacttccacatatggggaccagtacgatagaag cgcggaaacacatggccatgaatacagcaaagaatatcgttgccatggtgtcgacaaaccagagctga |
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Protein
| Protein ID | pfu_aug2.0_1080.1_01372.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1080.1_01372.t1 MSGANIYVTRAIPEEAKSLLRGVAQISIWDNEDAVPREELLKGVVGVQGIFCTISDVIDKEVLDSAGSNLRIVATMSVGK DHIDLIECSRRGVYVANTPDIAADSAADLAVALVLMATRRVIEGVDAVRKGQWEGWKPTWLCGTSLMNKTLGILGFGRVG FGIARRLKPFGIHKVIYNDIQEVEYALDFAEFVSFDELLAQSDILCICCSLTSLTRNMFTKSEFKKMKNSAVLINTSRGP IVNHVDLTEALKEGDIASAGLDVTDPEPLPVDHPLTSLPNCVILPHMGTSTIEARKHMAMNTAKNIVAMVSTNQS |
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