Gene
| Gene Model ID | pfu_aug2.0_1083.1_11420 |
|---|---|
| Locus | scaffold1083.1 : 34816 ... 48936 : + |
| To GenomeBrowser | scaffold1083.1:34816..48936 |
| Genes list of scaffold | scaffold1083.1 |
| Synonym | pfu_aug1.0_2127.1_44249 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1083.1_11420.t1 | 3 | 1 | TPR_11 | 2 | 34 | 1.5e-11 | 43.7 | 4.2e-05 | 0.052 | 13.2 |
| pfu_aug2.0_1083.1_11420.t1 | 4 | 1 | TPR_2 | 9 | 38 | 2.5e-11 | 42.6 | 0.0038 | 4.7 | 7.3 |
| pfu_aug2.0_1083.1_11420.t1 | 4 | 1 | TPR_8 | 12 | 33 | 8.1e-10 | 37.7 | 0.0071 | 8.8 | 6.3 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 1 | TPR_12 | 15 | 33 | 1.9e-12 | 46.9 | 0.47 | 580.0 | 0.5 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 1 | TPR_7 | 15 | 32 | 4.6e-10 | 38.5 | 0.42 | 520.0 | 0.8 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 1 | TPR_1 | 15 | 34 | 2.3e-08 | 33.2 | 0.16 | 190.0 | 1.8 |
| pfu_aug2.0_1083.1_11420.t1 | 4 | 2 | TPR_8 | 111 | 125 | 8.1e-10 | 37.7 | 0.37 | 450.0 | 1.0 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 2 | TPR_12 | 207 | 263 | 1.9e-12 | 46.9 | 1.4e-06 | 0.0017 | 18.2 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 2 | TPR_11 | 207 | 268 | 1.5e-11 | 43.7 | 1.1e-06 | 0.0013 | 18.3 |
| pfu_aug2.0_1083.1_11420.t1 | 4 | 2 | TPR_2 | 207 | 222 | 2.5e-11 | 42.6 | 1.1 | 1300.0 | -0.3 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 3 | TPR_12 | 237 | 300 | 1.9e-12 | 46.9 | 2.8e-13 | 3.5e-10 | 39.6 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 3 | TPR_11 | 239 | 300 | 1.5e-11 | 43.7 | 9.8e-10 | 1.2e-06 | 28.0 |
| pfu_aug2.0_1083.1_11420.t1 | 4 | 3 | TPR_2 | 239 | 269 | 2.5e-11 | 42.6 | 4.6e-05 | 0.057 | 13.3 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 2 | TPR_1 | 239 | 263 | 2.3e-08 | 33.2 | 7.8e-06 | 0.0097 | 15.4 |
| pfu_aug2.0_1083.1_11420.t1 | 4 | 3 | TPR_8 | 240 | 261 | 8.1e-10 | 37.7 | 0.00081 | 1.0 | 9.3 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 2 | TPR_7 | 243 | 271 | 4.6e-10 | 38.5 | 0.00012 | 0.14 | 11.9 |
| pfu_aug2.0_1083.1_11420.t1 | 4 | 4 | TPR_2 | 280 | 300 | 2.5e-11 | 42.6 | 3.1e-06 | 0.0039 | 17.0 |
| pfu_aug2.0_1083.1_11420.t1 | 4 | 4 | TPR_8 | 280 | 300 | 8.1e-10 | 37.7 | 5.0e-06 | 0.0062 | 16.2 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 3 | TPR_7 | 281 | 303 | 4.6e-10 | 38.5 | 7.0e-08 | 8.6e-05 | 22.0 |
| pfu_aug2.0_1083.1_11420.t1 | 3 | 3 | TPR_1 | 284 | 300 | 2.3e-08 | 33.2 | 6.5e-05 | 0.081 | 12.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1083.1_11420.t1 | gi|585698940|ref|XP_006822672.1| | PREDICTED: tetratricopeptide repeat protein 25-like isoform X3 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1083.1_11420.t1 | gi|585698933|ref|XP_006822671.1| | PREDICTED: tetratricopeptide repeat protein 25-like isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1083.1_11420.t1 | gi|524889120|ref|XP_005101121.1| | PREDICTED: tetratricopeptide repeat protein 25-like isoform X4 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1083.1_11420.t1 | gi|524889118|ref|XP_005101120.1| | PREDICTED: tetratricopeptide repeat protein 25-like isoform X3 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1083.1_11420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1083.1_11420.t1 atgaaccccggagataggaattgcctggtaacaagatctaaatgttggctacagctcggtaatgcagagaattccctgac ggacgcagaggaagcactcgtggaggataaaaactttatcaggctccagattctgttaaactatcagttcagggtgatct cacatacttctacaagcaagaagaggcttcaagatttggcatgtcaggatttccgtttgtccgactctagcgatgacaaa aagaaaggatacagtaagcccgtcagtaccaaaaaggagaaagtcaaagaaaaagaaagaccaaaaacctcgggagacca gaaaacaattcgacagttacttggagaattgtatggagataaagatttcctggaaaaactactgggcgatcctgccctaa ctggaggacaaaactctatgaacagagatattaaatgtaaggtagaggatggcttggacttcctagactcacgagctgat ttctggcgacagcagaagccgatgtacgcacgcaagagggatcgtgaaaaacagagacagagtgctaagtcccgacagag agaccccactgactaccttctgagatgtctagaggaaatagatgaagatcaagttaaggagagatatgatgagagtttaa caaaagccaagaagacacttcgcattgtagagaatatgtcggaggatcagttacagaataaagctgagttgttagccaat atacacagtcagattggtaacgcctatctagaactcgggaagtatagcctgtcactagaacaccacgaagaggatctcag gatagcaaatagcttctctcttgaagatgccaaatctagagcattagataatctaggaagagtttatgcaaggaaaggaa actttgagaaagctatagaggtcagagagtcagtagagaagttcttcagacttgtggcctggtccaataacaacaaaata tga |
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Protein
| Protein ID | pfu_aug2.0_1083.1_11420.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1083.1_11420.t1 MNPGDRNCLVTRSKCWLQLGNAENSLTDAEEALVEDKNFIRLQILLNYQFRVISHTSTSKKRLQDLACQDFRLSDSSDDK KKGYSKPVSTKKEKVKEKERPKTSGDQKTIRQLLGELYGDKDFLEKLLGDPALTGGQNSMNRDIKCKVEDGLDFLDSRAD FWRQQKPMYARKRDREKQRQSAKSRQRDPTDYLLRCLEEIDEDQVKERYDESLTKAKKTLRIVENMSEDQLQNKAELLAN IHSQIGNAYLELGKYSLSLEHHEEDLRIANSFSLEDAKSRALDNLGRVYARKGNFEKAIEVRESVEKFFRLVAWSNNNKI |
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