Gene
| Gene Model ID | pfu_aug2.0_1083.1_11421 |
|---|---|
| Locus | scaffold1083.1 : 70297 ... 74705 : - |
| To GenomeBrowser | scaffold1083.1:70297..74705 |
| Genes list of scaffold | scaffold1083.1 |
| Synonym | pfu_aug1.0_2211.1_44282 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1083.1_11421.t1 | 2 | 1 | fn3 | 12 | 86 | 4.5e-09 | 36.3 | 1.5e-12 | 4.5e-09 | 36.3 |
| pfu_aug2.0_1083.1_11421.t1 | 2 | 2 | fn3 | 161 | 183 | 4.5e-09 | 36.3 | 0.89 | 2600.0 | -1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1083.1_11421.t1 | gi|675879730|ref|XP_009025389.1| | hypothetical protein HELRODRAFT_189132 [Helobdella robusta] | 1.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_1083.1_11421.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1083.1_11421.t1 atggcgtccagcatccctccaacatatctggaatcggtaaatgtggagtcgtccaccacaacttctatacatttgacgtg gcaaataagtgacgatctttctgcttacgtcagaggtttccgcgtacattatcagaaagaggccagtaaatatgtacagt acggaccgctcttatcaaggtcatcatcatcatttgacatcacaaatctcgtcgccgacaccttctataaagtgtgcctt gttatgtacaaaaacgacacttcgccgatgcgacaatgcgtcggcgcatctacaacgaattggagacttcctgtttccat ctctatcggcagcagtattggagcggtgttagcgctgtctatgatcgtaattttggtgctcgctgtagcaaggtgcccgt ttgttttcaaattccaaaagaataagaaaaggtatgtttcaaggaaatatgacagcatgtcttcgcatttcacgtacgac ttcagcgatacggtaacgcatgacccggatgaatacatatcagaagatttagaacatagttcacattacgatactaccca tcataacaagcaaatggaacaggaatgtgactgcaacaaaaagaaatcgaatctgaaacataaatgtaacggaggtgtcc gaccgaaaataccgcctcccgcgcaaagacgacagcggtcgtatatttctcaaactaaggaggtttactcatccacagaa tcccaacctcctgtttatccccatcgttatgacaaagggaacacaaacgagaattataacatcgatgttgattgtcctca gtgtatgtattcaaataatgagactgctgggattggaaattatatcccagaatgcaattgtgaaaactgtttgaatatga atagaacagccgaagaggtaatgtgtcagcaatgtgaacatgacggttctattgttttacatctggaaccaaacaactct ttccacagtttgcaggaaaatatgcaagctcaagcaatgtctccagactgtaatttggcgagagattcaaataattcagg ggaaaataactctgatccatataaaacttggtgtgatcgtagacgatcgtcaatatctggccagatctccgtgtcagaaa ctctggcggacggtcattacctacaagaatggttaatggtgtggtttttcggagtacctggccacgtttcaacctcagag accacatga |
|
Protein
| Protein ID | pfu_aug2.0_1083.1_11421.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1083.1_11421.t1 MASSIPPTYLESVNVESSTTTSIHLTWQISDDLSAYVRGFRVHYQKEASKYVQYGPLLSRSSSSFDITNLVADTFYKVCL VMYKNDTSPMRQCVGASTTNWRLPVSISIGSSIGAVLALSMIVILVLAVARCPFVFKFQKNKKRYVSRKYDSMSSHFTYD FSDTVTHDPDEYISEDLEHSSHYDTTHHNKQMEQECDCNKKKSNLKHKCNGGVRPKIPPPAQRRQRSYISQTKEVYSSTE SQPPVYPHRYDKGNTNENYNIDVDCPQCMYSNNETAGIGNYIPECNCENCLNMNRTAEEVMCQQCEHDGSIVLHLEPNNS FHSLQENMQAQAMSPDCNLARDSNNSGENNSDPYKTWCDRRRSSISGQISVSETLADGHYLQEWLMVWFFGVPGHVSTSE TT |
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