Gene
| Gene Model ID | pfu_aug2.0_1083.1_11422 |
|---|---|
| Locus | scaffold1083.1 : 99516 ... 126445 : + |
| To GenomeBrowser | scaffold1083.1:99516..126445 |
| Genes list of scaffold | scaffold1083.1 |
| Synonym | pfu_aug1.0_2211.1_44283 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1083.1_11422.t1 | 2 | 1 | DUF1308 | 13 | 164 | 0.0 | 273.1 | 2.6e-36 | 1.9e-32 | 112.3 |
| pfu_aug2.0_1083.1_11422.t1 | 2 | 2 | DUF1308 | 300 | 451 | 0.0 | 273.1 | 0.0 | 0.0 | 158.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1083.1_11422.t1 | gi|676483355|ref|XP_009062998.1| | hypothetical protein LOTGIDRAFT_176014 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1083.1_11422.t1 | gi|556723922|ref|XP_005957772.1| | PREDICTED: UPF0415 protein C7orf25 homolog [Pantholops hodgsonii] | 0.0 |
| pfu_aug2.0_1083.1_11422.t1 | gi|573893397|ref|XP_006634451.1| | PREDICTED: UPF0415 protein C7orf25 homolog [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_1083.1_11422.t1 | gi|478528380|ref|XP_004438366.1| | PREDICTED: UPF0415 protein C7orf25 homolog [Ceratotherium simum simum] | 0.0 |
| pfu_aug2.0_1083.1_11422.t1 | gi|62859425|ref|NP_001016099.1| | UPF0415 protein C7orf25 homolog [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1083.1_11422.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1083.1_11422.t1 atgttgacaataaatatattgaaaaagcgtcatgtcaacacaaatgagagtgaactcaaaagcagtaacctgagccactt tactggtatcctacactctgcatgtcactttcctgacgtcacgaggctgctcagaccgttctctttggcaggaaaaaatg agagcctcgttgtggacgtcgtcgcaggtcaaggacgaatttggatcaaggtcatcgcaaggaaggcgcaagcattgcat cttatttgggcagggaaggggcagtttggagagagggatttggccaagcaagccgaagactacgtcaaatgtgcagacga gcatcacgtgtgtttcgccccaccccaagtacattttgtattttacaatcaagtgaccgcgcccatggctgcggagctag agagaagaggggtggtggtgtggggagaaagggtggaggtcagtcaagaagtcctagacaaagttcaacttgttgaagac ttttctgatgatgatgacgatgaggaggaagaaaacgatgatattagcgatgacagcgccacagatgaggatgataatga tgaaaatcaaaatattaaccataggttaccgagcagtgatctttcaagttcgtgtagtgggatacaatctcttcacatag ctaatgacatacatacggatacgtccgcccaagtcagtaaaagtgatagtgactcggaagcagacgaagtcaataaatct agtcgggacgcaagtgtatcaagtcataaaagtcacgagtcacaaagtgcagtcaataatggaacgacagacaaacccgc tgtctccaaatacttagacttctttgctgtctgtgatattatacccagaattattacctcattcccttttcactcgtccg aagaccttaatcaagtgcttcaggagtccataaatcgttcagagaagtcgttaaatcttgatattacgacgctaatcacc atggtttcctctgtgactcacggtggctgcaatttcatatttcccgaaagtatacttacacaacaggccgaggaagagcg gaagacgccggtgctacccttacttaacaaattactgaaaggaaaggatctctttgcatgtcagacagcagtagagagtt tctacagcgtccttaacacgcttggaggcatcaaagagaaggaaagagctgcagagtttatgaagagagtgagagtggtg ccagatcaaccgtcagagagaaccaaactgttaccagagacgggcaaaataaaaaaacgctctaaggtgatatttggaac aggggatgaactgaaggcaatcacagtaacagctaatgtgggatttgtcagggcggcagaacacatggagaagtttcttc cttccaagaatctcagtgaatatggttga |
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Protein
| Protein ID | pfu_aug2.0_1083.1_11422.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1083.1_11422.t1 MLTINILKKRHVNTNESELKSSNLSHFTGILHSACHFPDVTRLLRPFSLAGKNESLVVDVVAGQGRIWIKVIARKAQALH LIWAGKGQFGERDLAKQAEDYVKCADEHHVCFAPPQVHFVFYNQVTAPMAAELERRGVVVWGERVEVSQEVLDKVQLVED FSDDDDDEEEENDDISDDSATDEDDNDENQNINHRLPSSDLSSSCSGIQSLHIANDIHTDTSAQVSKSDSDSEADEVNKS SRDASVSSHKSHESQSAVNNGTTDKPAVSKYLDFFAVCDIIPRIITSFPFHSSEDLNQVLQESINRSEKSLNLDITTLIT MVSSVTHGGCNFIFPESILTQQAEEERKTPVLPLLNKLLKGKDLFACQTAVESFYSVLNTLGGIKEKERAAEFMKRVRVV PDQPSERTKLLPETGKIKKRSKVIFGTGDELKAITVTANVGFVRAAEHMEKFLPSKNLSEYG |
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