Gene
| Gene Model ID | pfu_aug2.0_1083.1_11423 |
|---|---|
| Locus | scaffold1083.1 : 127715 ... 142525 : - |
| To GenomeBrowser | scaffold1083.1:127715..142525 |
| Genes list of scaffold | scaffold1083.1 |
| Synonym | pfu_aug1.0_8017.1_60350 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1083.1_11423.t1 | 1 | 1 | HECT_2 | 11 | 376 | 4.80645e-43 | 147.2 | 0.0 | 5.89947e-43 | 146.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1083.1_11423.t1 | gi|676435452|ref|XP_009047561.1| | hypothetical protein LOTGIDRAFT_205133 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1083.1_11423.t1 | gi|524864402|ref|XP_005089038.1| | PREDICTED: E3 ubiquitin-protein ligase E3D-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1083.1_11423.t1 | gi|585701898|ref|XP_006822968.1| | PREDICTED: E3 ubiquitin-protein ligase E3D-like [Saccoglossus kowalevskii] | 6.0e-28 |
| pfu_aug2.0_1083.1_11423.t1 | gi|719759774|ref|XP_010215946.1| | PREDICTED: E3 ubiquitin-protein ligase E3D [Tinamus guttatus] | 3.0e-22 |
| pfu_aug2.0_1083.1_11423.t1 | gi|632973642|ref|XP_007903252.1| | PREDICTED: E3 ubiquitin-protein ligase E3D isoform X3 [Callorhinchus milii] | 6.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_1083.1_11423.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1083.1_11423.t1 atgttacagactattgaagacaatttctcttccatattttacagcttttcaccaaaatgcaaagatgatgtggaggtatc cataagcaatactacgatatcagtggaaatacatgacaccaaggccacttacactatacagggattacacatgatgccag atacctgcaggggacttacttaccatcctactacacgggaacttcagttcaatgtacaggttaaacgagttgcaggagat actttgaataattttccaaacaccaaaaggaagaaacttcaggacctattggtagaatacatacaaaccaatcaggacaa gtgttactgtagagcatgtggacagaagcttctggccaatgaaatgaaattccgtaatgtttaccccttgccatcagatg attggtcaaattttacagacatctggttttgtcaccaacatggtgaccaatcagaagctgacaatccagggggcgtgtcc atgctaccaaggtcacatgactgtcatgtgggtgacttgtattttctagtggattcaggtcatgtgactagaggcggagt tagggaacaatgtgatgttatatgctgttcaagatgccaaaacattataggagaagtatctgtagtgcctaatcagaatg gaatggtatcaaagaatgctagaacagtgtacaagctttatgaacaagccgttgtgttccaagaatttaaggaagaccaa atgttgagtacagagatacaaaattctagtttggaaggaagctttgcccagtatctgtatgagaagagccatctttacac aagttttaaatttctgatttctgctaaaagtaaaggaagagtcatacatctcctggtatggctgttggacatggacatac agttgtttcaaggtgatcttaagcaaggagattcctgtactgtgaagccaaggcagtctataaagctgttattccaggca tatggcttaggagaaaatggaaaatggaaaaacgatgctttgtatatacagtggaagaaagacaactctgtccagcagtt gatgctaccatatacgctgctgttagatctagtgtccgtactggtaaataatagcaagactgtaccagacttgtcaaggc tgtgtgacggattattgatcagccaccttaaatataaggatccttga |
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Protein
| Protein ID | pfu_aug2.0_1083.1_11423.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1083.1_11423.t1 MLQTIEDNFSSIFYSFSPKCKDDVEVSISNTTISVEIHDTKATYTIQGLHMMPDTCRGLTYHPTTRELQFNVQVKRVAGD TLNNFPNTKRKKLQDLLVEYIQTNQDKCYCRACGQKLLANEMKFRNVYPLPSDDWSNFTDIWFCHQHGDQSEADNPGGVS MLPRSHDCHVGDLYFLVDSGHVTRGGVREQCDVICCSRCQNIIGEVSVVPNQNGMVSKNARTVYKLYEQAVVFQEFKEDQ MLSTEIQNSSLEGSFAQYLYEKSHLYTSFKFLISAKSKGRVIHLLVWLLDMDIQLFQGDLKQGDSCTVKPRQSIKLLFQA YGLGENGKWKNDALYIQWKKDNSVQQLMLPYTLLLDLVSVLVNNSKTVPDLSRLCDGLLISHLKYKDP |
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