Gene
| Gene Model ID | pfu_aug2.0_10840.1_03072 |
|---|---|
| Locus | scaffold10840.1 : 1 ... 5372 : + |
| To GenomeBrowser | scaffold10840.1:1..5372 |
| Genes list of scaffold | scaffold10840.1 |
| Synonym | pfu_aug1.0_2975.1_59091 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10840.1_03072.t1 | 1 | 1 | DUF2036 | 2 | 82 | 3.6e-12 | 46.0 | 5.8e-16 | 4.3e-12 | 45.8 |
| pfu_aug2.0_10840.1_03072.t1 | 1 | 1 | DDE_3 | 85 | 157 | 1.2e-09 | 38.1 | 2.1e-13 | 1.6e-09 | 37.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10840.1_03072.t1 | gi|512923258|ref|XP_004930310.1| | 9.0e-27 | |
| pfu_aug2.0_10840.1_03072.t1 | gi|512906229|ref|XP_004926144.1| | 8.0e-24 | |
| pfu_aug2.0_10840.1_03072.t1 | gi|512933833|ref|XP_004932889.1| | 1.0e-22 | |
| pfu_aug2.0_10840.1_03072.t1 | gi|449680838|ref|XP_004209681.1| | 8.0e-21 | |
| pfu_aug2.0_10840.1_03072.t1 | gi|449675290|ref|XP_004208375.1| | 1.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_10840.1_03072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10840.1_03072.t1 atcggtactggagcatgttgtccattgctatggtgacagtatcaaacctgctaataaaacagacgaagaggaagaacaaa tggaaatagatacaaagttttataacctgaacgaggataaaatatgccgattttttgctgagcttgtcctacgtcatgct ggaaagttcaattttcaggagtttttgaaagtatgggaacagacagtcccatcagaaatgaagacaagtttacatcagtt agagtcacgggaaaattttaaactgaagtgccgcagacggcttactgaaggtgtgttgttccatcaggacaatgctcctg ttcacaagtctgtcactgccatggctgccattcatgattgtggctttaatttgattgagcatccaccttattcacctgat cttgctccatcagactttcatctattcccaaaactgaaagcagctgtttctggcacccactttcagttcgatgatgacgt catacttgcggtggatggctttctgaacagtcaagataaggagttttttaaaagtg |
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Protein
| Protein ID | pfu_aug2.0_10840.1_03072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10840.1_03072.t1 SVLEHVVHCYGDSIKPANKTDEEEEQMEIDTKFYNLNEDKICRFFAELVLRHAGKFNFQEFLKVWEQTVPSEMKTSLHQL ESRENFKLKCRRRLTEGVLFHQDNAPVHKSVTAMAAIHDCGFNLIEHPPYSPDLAPSDFHLFPKLKAAVSGTHFQFDDDV ILAVDGFLNSQDKEFFKS |
|