Gene
| Gene Model ID | pfu_aug2.0_10848.1_29712 |
|---|---|
| Locus | scaffold10848.1 : 8 ... 5361 : + |
| To GenomeBrowser | scaffold10848.1:8..5361 |
| Genes list of scaffold | scaffold10848.1 |
| Synonym | pfu_aug1.0_2580.1_58961 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10848.1_29712.t1 | 1 | 1 | RyR | 1 | 76 | 8.4e-25 | 86.6 | 2.1e-28 | 1.6e-24 | 85.7 |
| pfu_aug2.0_10848.1_29712.t1 | 1 | 1 | SPRY | 112 | 234 | 6.6e-23 | 81.1 | 1.6e-26 | 1.2e-22 | 80.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10848.1_29712.t1 | gi|585666073|ref|XP_002735182.2| | PREDICTED: LOW QUALITY PROTEIN: ryanodine receptor 2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_10848.1_29712.t1 | gi|119112859|ref|XP_318561.3| | AGAP010750-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_10848.1_29712.t1 | gi|157138486|ref|XP_001657320.1| | AAEL003837-PA [Aedes aegypti] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10848.1_29712.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10848.1_29712.t1 atggaagagttggtagatatgctggcagaaaatacacacaatgtatgggcaaaagatcgcatcaaacatggatggactta cggactgtttgaggaccaagtcaataaaagaagtccattcttggtgccttacaacaaagtggatgagaaaatcaaaagag caaacagggaaacatctaaccagactgtgaggacgttactagcgtatggttataacctggaacctccaaccagtgatatg ggtgatagcagttttacagcgatggcaaagaacttggcagaaagaagaagtgccaccagaacatacagggcagaactcac gtatacagtcacaagtggaaaatggtattatgagtttgaggcagtaacatgcggctacatgaaagtgggctgggccaaag tgtcatgtgacccttgtactgagctgggattggatggattgtcatacacatttgatggcttgattggcagaaagtggaac caaggagctgagcagtatggtaagaactggagacctggtgatgtcataggatgtatgctggatctgacagataggaccat cacgttttccctgaatggagaattgatgatggattctctcggccaagagatagctttccgtggtattgacactgacgagg gctatgtgccggccttcaccctcagtagctatgaacagggcaaggttaactttggtcaagatgtcaacacactgaagtac tttacagtctgtggtctacaggagggatatgaacctttctgtgtaaacatgactcgacagatgacactttggtacggtaa agagttatctttcttcagacccattagcgaggaacattcacagctacaagttcagagaatcccaggaggggcaaatgtga caccatgtttgaaagttttgtcaaagacatttggaacactggagcaagtacatttggaataccttagacttagccttcct gtcaagtgtaaagaggagttcatatcaaagtcaagtacccttccatctgcctatgaaaggagaatgaatttggaaaatat ccgtcgtcatgaaatggacatagaggaggagcatggcaaccttgacttctcccttactgacgaccttgacaccactgtag aagatggctccctagagagaagcagtaaaatcctcatgacag |
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Protein
| Protein ID | pfu_aug2.0_10848.1_29712.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10848.1_29712.t1 MEELVDMLAENTHNVWAKDRIKHGWTYGLFEDQVNKRSPFLVPYNKVDEKIKRANRETSNQTVRTLLAYGYNLEPPTSDM GDSSFTAMAKNLAERRSATRTYRAELTYTVTSGKWYYEFEAVTCGYMKVGWAKVSCDPCTELGLDGLSYTFDGLIGRKWN QGAEQYGKNWRPGDVIGCMLDLTDRTITFSLNGELMMDSLGQEIAFRGIDTDEGYVPAFTLSSYEQGKVNFGQDVNTLKY FTVCGLQEGYEPFCVNMTRQMTLWYGKELSFFRPISEEHSQLQVQRIPGGANVTPCLKVLSKTFGTLEQVHLEYLRLSLP VKCKEEFISKSSTLPSAYERRMNLENIRRHEMDIEEEHGNLDFSLTDDLDTTVEDGSLERSSKILMT |
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