Gene
| Gene Model ID | pfu_aug2.0_1085.1_18077 |
|---|---|
| Locus | scaffold1085.1 : 76836 ... 94371 : + |
| To GenomeBrowser | scaffold1085.1:76836..94371 |
| Genes list of scaffold | scaffold1085.1 |
| Synonym | pfu_aug1.0_16849.1_69009 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| histone protein | GO:0000003 GO:0000786 GO:0002119 GO:0003677 GO:0005811 GO:0009792 GO:0035267 GO:0040011 GO:0046982 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1085.1_18077.t1 | 1 | 1 | Histone | 38 | 104 | 2.9e-19 | 68.9 | 1.1e-22 | 5.3e-19 | 68.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1085.1_18077.t1 | gi|576042622|ref|XP_006695184.1| | putative histone H2B.1 protein [Chaetomium thermophilum var. thermophilum DSM 1495] | 8.99998e-41 |
| pfu_aug2.0_1085.1_18077.t1 | gi|585677675|ref|XP_006819186.1| | PREDICTED: late histone H2B.L3-like isoform X2 [Saccoglossus kowalevskii] | 9.99995e-41 |
| pfu_aug2.0_1085.1_18077.t1 | gi|312088902|ref|XP_003146042.1| | hypothetical protein LOAG_10470 [Loa loa] | 4.00001e-40 |
| pfu_aug2.0_1085.1_18077.t1 | gi|308450808|ref|XP_003088435.1| | hypothetical protein CRE_15218 [Caenorhabditis remanei] | 3.0e-39 |
| pfu_aug2.0_1085.1_18077.t1 | gi|366989933|ref|XP_003674734.1| | hypothetical protein NCAS_0B02760 [Naumovozyma castellii CBS 4309] | 3.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_1085.1_18077.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1085.1_18077.t1 atggctccgaagaagtcgaaaagtaaatcaaagcaaagaatttccccagtttcaacgacgagtagaaagaagcaaaggaa aggaggaaaaaagaacgacaaaaaggcgaaaaagcggactttcagttcttatatattccgagtacttcgagaggtgaaac cagggatggaaatatcgagtaagtcaatgtcagtgatgaacagttttatgaatgacatgtttgaccgtattgctgcagag gcagctaagctagccaagcgtggtaagaaacggacattgtccagcagggagatccagaccgctgtccgtttgatacttcc cggagagctggccaagcatgcagtcagtgaagggaccaaggcagtggccaagtataccagtagcataaccgctagggatt cctccgtgtttgatacttcctgtgatatgataggatcggtacctaatgcagtccagaaggatagtcatgccttcatgtca atagtcaccaaaccagacggttatcctatatcactagaatcgatggttacaacgatgaaacaggcagtgggaagttccca tgtccaaccggcctacagtaccagtgtcatggtggacattgcggatgttgtcatcttgttcaaggaacttacaattatgg ttgggagaaacctttctgtgatcgtgggtcatgccagtgctacacatcagagtgatgaggtcgatatgatgatttatgga gtgataaaaccaatatcgaccgaggccgaggtcgatattggttttatcactccataa |
|
Protein
| Protein ID | pfu_aug2.0_1085.1_18077.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1085.1_18077.t1 MAPKKSKSKSKQRISPVSTTSRKKQRKGGKKNDKKAKKRTFSSYIFRVLREVKPGMEISSKSMSVMNSFMNDMFDRIAAE AAKLAKRGKKRTLSSREIQTAVRLILPGELAKHAVSEGTKAVAKYTSSITARDSSVFDTSCDMIGSVPNAVQKDSHAFMS IVTKPDGYPISLESMVTTMKQAVGSSHVQPAYSTSVMVDIADVVILFKELTIMVGRNLSVIVGHASATHQSDEVDMMIYG VIKPISTEAEVDIGFITP |
|