Gene
| Gene Model ID | pfu_aug2.0_1088.1_28038 |
|---|---|
| Locus | scaffold1088.1 : 48046 ... 58065 : + |
| To GenomeBrowser | scaffold1088.1:48046..58065 |
| Genes list of scaffold | scaffold1088.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1088.1_28038.t1 | 2 | 1 | Steroid_dh | 67 | 93 | 0.0 | 172.5 | 0.51 | 1900.0 | -1.5 |
| pfu_aug2.0_1088.1_28038.t1 | 2 | 2 | Steroid_dh | 109 | 253 | 0.0 | 172.5 | 0.0 | 0.0 | 172.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1088.1_28038.t1 | gi|676478818|ref|XP_009061550.1| | hypothetical protein LOTGIDRAFT_194080 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1088.1_28038.t1 | gi|557024891|ref|XP_006012612.1| | PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 1 isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1088.1_28038.t1 | gi|742108371|ref|XP_010871531.1| | PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 1 [Esox lucius] | 0.0 |
| pfu_aug2.0_1088.1_28038.t1 | gi|551664165|ref|XP_005834846.1| | hypothetical protein GUITHDRAFT_86244 [Guillardia theta CCMP2712] | 0.0 |
| pfu_aug2.0_1088.1_28038.t1 | gi|657804672|ref|XP_008329457.1| | PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 1 isoform X2 [Cynoglossus semilaevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1088.1_28038.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1088.1_28038.t1 atgttaacttccgaccattttgtatatacatcgtatgtgatgatcgtatggggcgtgtcaaatttcatatctttattaca tacgaccgcgccttacggtcggtacgtacgtgaggggtggggctttaccgtcaatgcgaaactggcttggttcgtacaag aactcccctcccttgtcattccactgtgtgttttttacaaaaactattatggtttcgctgacgacatacatatacgtgta cccggaatgattgtggtggcattatttattacacattattttcataggacaatcatatacccactaagattacgtaacag taagcccataccgttgataccgttcgtgattgccttcgtcttctgttcgctgaatggatacctacaagctgagtaccata tgtcatacaccataatacaacctgacagtttttttgttgctgggataatcctgttcttttgtggaatgttcgtcaatata cactcggataatattctgaggcgactgcgcagtgaaagtcagcgtggataccaagtccctgaaggaggaatgtttgaata cgtctccggagcaaactttctaggggagataatagagtggacgggacttgcaattgcttctcgcactatgcctgcaatag cttttgccatatttacttgttgcaatatcggtccacgcgcttggcatcatcacagattctatttggaaaagttcgagact tatccgaaaaaccgaaaggccttgataccttacatcctctga |
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Protein
| Protein ID | pfu_aug2.0_1088.1_28038.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1088.1_28038.t1 MLTSDHFVYTSYVMIVWGVSNFISLLHTTAPYGRYVREGWGFTVNAKLAWFVQELPSLVIPLCVFYKNYYGFADDIHIRV PGMIVVALFITHYFHRTIIYPLRLRNSKPIPLIPFVIAFVFCSLNGYLQAEYHMSYTIIQPDSFFVAGIILFFCGMFVNI HSDNILRRLRSESQRGYQVPEGGMFEYVSGANFLGEIIEWTGLAIASRTMPAIAFAIFTCCNIGPRAWHHHRFYLEKFET YPKNRKALIPYIL |
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