Gene
| Gene Model ID | pfu_aug2.0_1088.1_28045 |
|---|---|
| Locus | scaffold1088.1 : 98110 ... 102065 : - |
| To GenomeBrowser | scaffold1088.1:98110..102065 |
| Genes list of scaffold | scaffold1088.1 |
| Synonym | pfu_aug1.0_36251.1_41002 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1088.1_28045.t1 | 2 | 1 | Ank_2 | 43 | 96 | 1.4e-27 | 95.8 | 9.8e-14 | 2.9e-10 | 40.3 |
| pfu_aug2.0_1088.1_28045.t1 | 3 | 1 | Ank_5 | 54 | 100 | 4.5e-26 | 90.2 | 1.8e-13 | 5.3e-10 | 39.2 |
| pfu_aug2.0_1088.1_28045.t1 | 2 | 1 | Ank_4 | 54 | 87 | 1.0e-21 | 76.8 | 1.8e-09 | 5.3e-06 | 26.7 |
| pfu_aug2.0_1088.1_28045.t1 | 3 | 1 | Ank | 67 | 97 | 1.2e-24 | 84.8 | 2.8e-13 | 8.3e-10 | 37.9 |
| pfu_aug2.0_1088.1_28045.t1 | 3 | 1 | Ank_3 | 67 | 94 | 1.3e-19 | 68.2 | 6.4e-11 | 1.9e-07 | 30.6 |
| pfu_aug2.0_1088.1_28045.t1 | 2 | 2 | Ank_2 | 99 | 156 | 1.4e-27 | 95.8 | 2.1e-18 | 6.3e-15 | 55.2 |
| pfu_aug2.0_1088.1_28045.t1 | 3 | 2 | Ank_5 | 102 | 141 | 4.5e-26 | 90.2 | 8.0e-12 | 2.4e-08 | 33.9 |
| pfu_aug2.0_1088.1_28045.t1 | 3 | 2 | Ank | 103 | 131 | 1.2e-24 | 84.8 | 5.7e-11 | 1.7e-07 | 30.6 |
| pfu_aug2.0_1088.1_28045.t1 | 2 | 2 | Ank_4 | 103 | 153 | 1.0e-21 | 76.8 | 3.9e-16 | 1.2e-12 | 48.0 |
| pfu_aug2.0_1088.1_28045.t1 | 3 | 2 | Ank_3 | 103 | 127 | 1.3e-19 | 68.2 | 2.3e-08 | 6.7e-05 | 22.7 |
| pfu_aug2.0_1088.1_28045.t1 | 3 | 3 | Ank_5 | 125 | 174 | 4.5e-26 | 90.2 | 1.6e-09 | 4.8e-06 | 26.6 |
| pfu_aug2.0_1088.1_28045.t1 | 3 | 3 | Ank | 133 | 165 | 1.2e-24 | 84.8 | 3.3e-05 | 0.098 | 12.5 |
| pfu_aug2.0_1088.1_28045.t1 | 3 | 3 | Ank_3 | 133 | 155 | 1.3e-19 | 68.2 | 0.00015 | 0.44 | 10.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1088.1_28045.t1 | gi|72166790|ref|XP_790997.1| | 0.0 | |
| pfu_aug2.0_1088.1_28045.t1 | gi|410922661|ref|XP_003974801.1| | 0.0 | |
| pfu_aug2.0_1088.1_28045.t1 | gi|196012626|ref|XP_002116175.1| | hypothetical protein TRIADDRAFT_7160 [Trichoplax adhaerens] | 9.80909e-45 |
| pfu_aug2.0_1088.1_28045.t1 | gi|165972481|ref|NP_001107112.1| | ankyrin repeat domain-containing protein 39 [Danio rerio] | 1.96182e-44 |
| pfu_aug2.0_1088.1_28045.t1 | gi|641738597|ref|NP_001280076.1| | ankyrin repeat domain 39 [Callorhinchus milii] | 2.94273e-44 |
Transcript
| Transcript ID | pfu_aug2.0_1088.1_28045.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1088.1_28045.t1 atggcctttgatgatgtaaaacacagaccacatgaacacagtggttgttgttcaaaatttgccaccccatctgtccatca aagtttaagtgaaattgattttgagagaggaatatggccatcagccctctgtggggactgtgatgaagtagagaaacatc tgaaaaaaggagttcatgtagacagcacagaccaatcaggttatactgctttgcattatgcagcaaggaatggtcacctg aaagtatgtgaaatactcctaaaggcaggagctacagcaaatataaaaacaaggtcaggagacgtgtcacccctacatag agctgcttacaagggacatgtagatataatgaaacttctaattaagtacaaagctgatccagaatgtcaagattctgatg gaaaaactgccatgcacaaggctacagaagaaggacaatgtgaagcagtaaagctacttatggatgtgtgcccagaatgt gcaaatataaaagattttaaaggaaaaactcccatagactacataaaagacgataaatctaacatatttacaatattgaa atctactagtgattga |
|
Protein
| Protein ID | pfu_aug2.0_1088.1_28045.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1088.1_28045.t1 MAFDDVKHRPHEHSGCCSKFATPSVHQSLSEIDFERGIWPSALCGDCDEVEKHLKKGVHVDSTDQSGYTALHYAARNGHL KVCEILLKAGATANIKTRSGDVSPLHRAAYKGHVDIMKLLIKYKADPECQDSDGKTAMHKATEEGQCEAVKLLMDVCPEC ANIKDFKGKTPIDYIKDDKSNIFTILKSTSD |
|