Gene
| Gene Model ID | pfu_aug2.0_1088.1_28046 |
|---|---|
| Locus | scaffold1088.1 : 104836 ... 110352 : + |
| To GenomeBrowser | scaffold1088.1:104836..110352 |
| Genes list of scaffold | scaffold1088.1 |
| Synonym | pfu_aug1.0_5035.1_23718 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1088.1_28046.t2 | 1 | 1 | HAD_2 | 12 | 187 | 4.1e-19 | 69.4 | 1.4e-22 | 5.2e-19 | 69.1 |
| pfu_aug2.0_1088.1_28046.t2 | 1 | 1 | Hydrolase | 81 | 181 | 9.3e-08 | 32.7 | 3.1e-11 | 1.1e-07 | 32.4 |
| pfu_aug2.0_1088.1_28046.t2 | 2 | 1 | Hydrolase_like | 101 | 110 | 1.5e-08 | 34.1 | 0.89 | 3300.0 | -2.2 |
| pfu_aug2.0_1088.1_28046.t2 | 2 | 2 | Hydrolase_like | 140 | 209 | 1.5e-08 | 34.1 | 1.2e-11 | 4.3e-08 | 32.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1088.1_28046.t2 | gi|347969790|ref|XP_314275.5| | AGAP003372-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_1088.1_28046.t2 | gi|532035956|ref|XP_005360871.1| | PREDICTED: pseudouridine-5'-monophosphatase-like [Microtus ochrogaster] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1088.1_28046.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1088.1_28046.t1 atgatccgtagtgactttctgttaaaccttgtaattatagacacagagagattttatacagaaattacccagtccattct ggatgaatacaagaaaactttcacgtgggaagtgaaatcacagttaatggggaagaaagagagagaggcaacaaagttcc taatagatgcactagagctgcctataacagtagatgaatttttagaacgttcccatgctgaacagaataggttgttcccc ttagtcccattgatgccaggtgcagataaactagtgcgacacctccataaatgtaacgtccctattgctgtagcgacagg atccaacactcagagttttgcattgaaatcatccgggcataaagagtttttcagtctgtttcatcacacagtactaagtg gggacgaccctgaggtggaacatggtaaaccagcacctgactgcttcttactggctgctaaacgattcaaagacagcccc gaccctgcaaaggttttggtatttgaggatgcacctaatggcgtagatgcagctcacgcagcaggaatgcagtgtgtttg ggtaccacatgatgagcaggaccataatacacacaaacacaaatgtacacaaatactggacaatctggaaaactttatac cagaatcctttggtttaccagcatacacttcatga |
|
| Transcript ID | pfu_aug2.0_1088.1_28046.t2 |
| Definition | - |
>pfu_aug2.0_1088.1_28046.t2 atggaatcactatgtggtttccttttgatcattttagatacagaaaaggtatatgtagacatcacaacaaagatagcggc agagttcggcaaaacttactcatgggagatagagttcaaaataatggggaaaaaggaaaccgaggcagccaaagctatca tagatgcactagagctgcctataacagtagatgaatttttagaacgttcccatgctgaacagaataggttgttcccctta gtcccattgatgccaggtgcagataaactagtgcgacacctccataaatgtaacgtccctattgctgtagcgacaggatc caacactcagagttttgcattgaaatcatccgggcataaagagtttttcagtctgtttcatcacacagtactaagtgggg acgaccctgaggtggaacatggtaaaccagcacctgactgcttcttactggctgctaaacgattcaaagacagccccgac cctgcaaaggttttggtatttgaggatgcacctaatggcgtagatgcagctcacgcagcaggaatgcagtgtgtttgggt accacatgatgagcaggaccataatacacacaaacacaaatgtacacaaatactggacaatctggaaaactttataccag aatcctttggtttaccagcatacacttcatga |
|
Protein
| Protein ID | pfu_aug2.0_1088.1_28046.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1088.1_28046.t1 MIRSDFLLNLVIIDTERFYTEITQSILDEYKKTFTWEVKSQLMGKKEREATKFLIDALELPITVDEFLERSHAEQNRLFP LVPLMPGADKLVRHLHKCNVPIAVATGSNTQSFALKSSGHKEFFSLFHHTVLSGDDPEVEHGKPAPDCFLLAAKRFKDSP DPAKVLVFEDAPNGVDAAHAAGMQCVWVPHDEQDHNTHKHKCTQILDNLENFIPESFGLPAYTS |
|
| Protein ID | pfu_aug2.0_1088.1_28046.t2 |
| Definition | - |
>pfu_aug2.0_1088.1_28046.t2 MESLCGFLLIILDTEKVYVDITTKIAAEFGKTYSWEIEFKIMGKKETEAAKAIIDALELPITVDEFLERSHAEQNRLFPL VPLMPGADKLVRHLHKCNVPIAVATGSNTQSFALKSSGHKEFFSLFHHTVLSGDDPEVEHGKPAPDCFLLAAKRFKDSPD PAKVLVFEDAPNGVDAAHAAGMQCVWVPHDEQDHNTHKHKCTQILDNLENFIPESFGLPAYTS |
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