Gene
| Gene Model ID | pfu_aug2.0_1088.1_28050 |
|---|---|
| Locus | scaffold1088.1 : 147646 ... 171169 : + |
| To GenomeBrowser | scaffold1088.1:147646..171169 |
| Genes list of scaffold | scaffold1088.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1088.1_28050.t1 | 2 | 1 | V-set | 24 | 117 | 2.3e-07 | 30.6 | 1.2e-10 | 2.3e-07 | 30.6 |
| pfu_aug2.0_1088.1_28050.t1 | 2 | 2 | V-set | 188 | 188 | 2.3e-07 | 30.6 | 3.0 | 5700.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1088.1_28050.t1 | gi|524878083|ref|XP_005095734.1| | PREDICTED: coagulation factor V-like [Aplysia californica] | 2.0e-21 |
| pfu_aug2.0_1088.1_28050.t1 | gi|589913688|ref|XP_006970187.1| | PREDICTED: histidine-rich glycoprotein-like, partial [Peromyscus maniculatus bairdii] | 2.0e-15 |
| pfu_aug2.0_1088.1_28050.t1 | gi|457872191|ref|XP_004223015.1| | tryptophan-rich antigen [Plasmodium cynomolgi strain B] | 9.0e-15 |
| pfu_aug2.0_1088.1_28050.t1 | gi|662209990|ref|XP_008478617.1| | PREDICTED: microtubule-associated protein 6-like [Diaphorina citri] | 2.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_1088.1_28050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1088.1_28050.t1 atgagtaatattatagacaatagtgactgttgtcaagaagcagcatacatatctacaccaggaactgtgtcaggatgtat tggtggtagtgctacatttacttgggtatatgacaatccaggagatgctagttcagttatatgggactttggatcagtaa atgtttttaattacaaaccatcaactggatgtacagttcaaggagcagcacagtttgcaggacgagttacacataatgga aatggttccatcacattggattctttaacagcaaatgacgcaggatcgtacacctgcactacaagttacaatagttatcc aacagcagttgatacagcttctcttactgtgaatgacaagtcagagaccataataaacctgtcaaagacaagtcaaagat cagtcataaacctgtcaaagaccagtcaaaaacctgtcaaagacaagtcaaagatcagtcataaacctgtcaaagacaag tcaaagaccagtcataaacctgtcaaaggcaagtcaaagaccagtcataagcctgtcaaagacaagtcaaagacaagtca taaacctctcaaagacaagtcaaacaccagtcataaacatgtcaaagacaagtctaagaccagtcataaacctctcaaag acaagtcaaggaccagtcataaacctgttaaagacaagtccaagactagtcataaacctgtcaaagacaagtcagagact agtcataaacctgtcaaagaccagtcagaaacatgtcaaagaccagtcataaacctgtcaaagacatccataaacctgtc atag |
|
Protein
| Protein ID | pfu_aug2.0_1088.1_28050.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1088.1_28050.t1 MSNIIDNSDCCQEAAYISTPGTVSGCIGGSATFTWVYDNPGDASSVIWDFGSVNVFNYKPSTGCTVQGAAQFAGRVTHNG NGSITLDSLTANDAGSYTCTTSYNSYPTAVDTASLTVNDKSETIINLSKTSQRSVINLSKTSQKPVKDKSKISHKPVKDK SKTSHKPVKGKSKTSHKPVKDKSKTSHKPLKDKSNTSHKHVKDKSKTSHKPLKDKSRTSHKPVKDKSKTSHKPVKDKSET SHKPVKDQSETCQRPVINLSKTSINLS |
|