Gene
| Gene Model ID | pfu_aug2.0_109.1_30216 |
|---|---|
| Locus | scaffold109.1 : 35446 ... 38815 : - |
| To GenomeBrowser | scaffold109.1:35446..38815 |
| Genes list of scaffold | scaffold109.1 |
| Synonym | pfu_aug1.0_27588.1_11860 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_109.1_30216.t1 | 2 | 1 | Mito_carr | 36 | 80 | 1.9e-26 | 91.5 | 6.5e-13 | 9.6e-09 | 34.8 |
| pfu_aug2.0_109.1_30216.t1 | 2 | 2 | Mito_carr | 81 | 155 | 1.9e-26 | 91.5 | 6.8e-20 | 1.0e-15 | 57.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_109.1_30216.t1 | gi|156351154|ref|XP_001622386.1| | predicted protein [Nematostella vectensis] | 5.0e-38 |
| pfu_aug2.0_109.1_30216.t1 | gi|167525373|ref|XP_001747021.1| | hypothetical protein [Monosiga brevicollis MX1] | 2.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_109.1_30216.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30216.t1 atggacagcagaaagtttgaaggccacggcaagccagacatatcacgtaaatctgatataaannnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnacagaaagacatgggcttcagatggcatggtgggaatgtatagaggcttccttg tttcctgtgtcggaatgatagtctacagagggttttacttcggattttatgacgctttaaagagtatcttccttgacgac aaatcaccgatgacgtcatcagtagctgtcggagttattgcgacattttcagcaggccttgttgcttatcccttcgacac tataagagtacgcatgttgatgcggtctatagagcctgttaaatacaagaactttatagattgtggatcgcagatcctga aaaaagaaggggttcggcctctcatgaatggatttgtcgttactattttcagaggggtcattggtggtatagctattccc atacttgacaaagtccttaataaagtacttggtgaagtaggtgacaaagtacgaatgcatcgaaattccgaagacaaatg a |
|
Protein
| Protein ID | pfu_aug2.0_109.1_30216.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30216.t1 MDSRKFEGHGKPDISRKSDIXXXXXXXXXXXXXXXXRKTWASDGMVGMYRGFLVSCVGMIVYRGFYFGFYDALKSIFLDD KSPMTSSVAVGVIATFSAGLVAYPFDTIRVRMLMRSIEPVKYKNFIDCGSQILKKEGVRPLMNGFVVTIFRGVIGGIAIP ILDKVLNKVLGEVGDKVRMHRNSEDK |
|