Gene
| Gene Model ID | pfu_aug2.0_109.1_30221 |
|---|---|
| Locus | scaffold109.1 : 340758 ... 346504 : + |
| To GenomeBrowser | scaffold109.1:340758..346504 |
| Genes list of scaffold | scaffold109.1 |
| Synonym | pfu_aug1.0_17634.1_61730 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_109.1_30221.t1 | 1 | 1 | Homeobox | 150 | 207 | 5.0e-08 | 32.4 | 2.0e-11 | 9.7e-08 | 31.5 |
| pfu_aug2.0_109.1_30221.t1 | 1 | 1 | Homeobox_KN | 165 | 204 | 3.6e-15 | 55.3 | 1.9e-18 | 9.2e-15 | 54.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_109.1_30221.t1 | gi|755931431|ref|XP_011313984.1| | PREDICTED: homeobox protein caupolican isoform X2 [Fopius arisanus] | 3.0e-33 |
| pfu_aug2.0_109.1_30221.t1 | gi|755931428|ref|XP_011313983.1| | PREDICTED: iroquois-class homeodomain protein IRX-3 isoform X1 [Fopius arisanus] | 5.0e-33 |
| pfu_aug2.0_109.1_30221.t1 | gi|240960559|ref|XP_002400561.1| | Iroquois-class homeobox protein IRX, putative [Ixodes scapularis] | 6.0e-33 |
| pfu_aug2.0_109.1_30221.t1 | gi|240960568|ref|XP_002400564.1| | Iroquois-class homeobox protein IRX, putative [Ixodes scapularis] | 5.0e-32 |
| pfu_aug2.0_109.1_30221.t1 | gi|91079258|ref|XP_971676.1| | PREDICTED: homeobox protein caupolican [Tribolium castaneum] | 8.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_109.1_30221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30221.t1 atgtcgatgccaagtcgttctgaccatttggtgtgcacggacccactttgccccaccacgtgtgacccctacacgggccg catcctctgtcgatgctatcaacagatgcaggatacacggtcatcttaccaacctaacggacaagtggctgctccacccc cacccgcctataactccatgtacccacagaactaccattccatggagccaacactggccgcagcatcgggattgcagccg ccgccaccaccggcaccacccaggatggataacggtgtccccttccctcccaccacaacactagcccagtttccgtccaa cctctcccccaccctggcctccacttctaatatgtctaacgtaggaaccctggatactctactacgatctcaagtctaca actatatgaacagtgtacagtatgctaatttggatctcaatggatcaagaagaaaaaatgccacacgggagagcaccgct gctttaaaggcttggttaaaggaacacagaaagaacccctacccaaccaaggcagagaaagtcatgctggcaattgtaac caaaatgagcctgactcagatatctacgtggttcgccaatgctagacgacgactgaagaaagaaaatggcggcgagctga aaccgttagatgggaatgagaattctaactcaagcgatgatgataatacaagcgactcatccttattcacacaggctaca cagcgtctacaggaaagtgagggcggagcgtctccaggtttcccatctgtagacgccttgcgtgtaccacagtcaatgac gccaatcacaaacgggacgccagagcaaacactgagcctccctcctgctcttgatttccagaacagcaatgacttacctc cagctgacttggcatccggatccgcagacagtcttccggttttgttagccggtgattctgatattaaacagcaatccaca cttccgtccttctccacatttatggggaactcaaatcagccaaccatggactaccctaaccacttcaacaactgccagtc ccaaacaccgtgtgatcaatcaagcatgtacggcctcggttcttttaatacaacagcatactcaacatccgacttttcaa gtgcaggaaccggaagttacatgccgaattatggttatgactctcaacatccacagttcgcgcatgaatacaactcaacg ggatccgataaagaaaacatccacctccccgccacgcagatgcagcaaaatggatttctcatagattcgttgaccggaaa gtccagcgatagtgacagtagtggtcagaaaagtactgacagcagtccgtcttccgtgaaatccaaaatctggtccatta cagagattataggatcaagtatgtccaaaattatggacggaactgagcagccgctgcccgcatttacacagaccctcgct tcaactgaccaatga |
|
Protein
| Protein ID | pfu_aug2.0_109.1_30221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30221.t1 MSMPSRSDHLVCTDPLCPTTCDPYTGRILCRCYQQMQDTRSSYQPNGQVAAPPPPAYNSMYPQNYHSMEPTLAAASGLQP PPPPAPPRMDNGVPFPPTTTLAQFPSNLSPTLASTSNMSNVGTLDTLLRSQVYNYMNSVQYANLDLNGSRRKNATRESTA ALKAWLKEHRKNPYPTKAEKVMLAIVTKMSLTQISTWFANARRRLKKENGGELKPLDGNENSNSSDDDNTSDSSLFTQAT QRLQESEGGASPGFPSVDALRVPQSMTPITNGTPEQTLSLPPALDFQNSNDLPPADLASGSADSLPVLLAGDSDIKQQST LPSFSTFMGNSNQPTMDYPNHFNNCQSQTPCDQSSMYGLGSFNTTAYSTSDFSSAGTGSYMPNYGYDSQHPQFAHEYNST GSDKENIHLPATQMQQNGFLIDSLTGKSSDSDSSGQKSTDSSPSSVKSKIWSITEIIGSSMSKIMDGTEQPLPAFTQTLA STDQ |
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