Gene
| Gene Model ID | pfu_aug2.0_109.1_30223 |
|---|---|
| Locus | scaffold109.1 : 358528 ... 414035 : + |
| To GenomeBrowser | scaffold109.1:358528..414035 |
| Genes list of scaffold | scaffold109.1 |
| Synonym | pfu_aug1.0_9224.1_38880 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_109.1_30223.t1 | 2 | 1 | RVT_1 | 175 | 375 | 4.3e-33 | 114.4 | 2.7e-27 | 1.0e-23 | 83.8 |
| pfu_aug2.0_109.1_30223.t1 | 2 | 2 | RVT_1 | 409 | 511 | 4.3e-33 | 114.4 | 2.8e-10 | 1.0e-06 | 28.2 |
| pfu_aug2.0_109.1_30223.t1 | 1 | 1 | Aminotran_1_2 | 914 | 1245 | 7.6e-27 | 94.2 | 6.0e-28 | 2.2e-24 | 86.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_109.1_30223.t1 | gi|524898324|ref|XP_005105612.1| | PREDICTED: alanine aminotransferase 2-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_109.1_30223.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30223.t1 atggtcctgtgtctcaggtcggtgtataagcaagttaaagattcctcactgcttaggatgtgtgggatgggtctgtcaca caggcattgctgttcaaatctcgttaccaaggaagacgttgtttttgcggccgaactaaaggatactatcctcgatgcca aaacacgtgacactaaattgttccataagctcatccgagaacagagaggagatgtatcggacacgaccacagagattata gtgaatcaggaaagatatcgcggtaacgatgctattgagatctggaaagagcatttcgagcaactagcaagtgcctccag cgactcgtcatttgatgtgcaatacacaaaacaggttgaggatgacttctatgtgataatggacatatgtaaagagactc cagattcatccaaagttatatataccactacagtggatgaaataacctcagcagtgaaacaactaaacacaaataagtca cccgatgcttatggtgtaacaacagaacatgttctacatggagtgattgggaaactcctagaaataatcctcagaaccag acttagagatatacttgacaacagtcaaaatccactccagagggggttcacagcaaagtcctcccctctaaactgtgcgc taattatagaagaatttattagggaatcaagggacttaaaaaaggagacattcgtagccctcctggatgcgaaggcagcc tttgatgtagtcaaccatcatagtctattacggaagctgtacaactacggggtggatgggagtttatggaaccttgtgtg tgacttccacaataatgccgtttctgcagttaaatggaatgggcagctttccgacacatttaatgtcacccagggagtac gtcagggcgggatacttagcgccgacctatacaagttatatataaacgatttactgaatagaatgcaagacagtcaaatc ggtggaaaagttggaaatatcccttgcagtgctccgacttgcgcagacgacatgtccaatttaagtaacacagaaggaga tctacagacactctgtaatattgctcatgactatagcactatggaaaaatataagttacagccaacaaaaagtgttgtac ttcctgttaatacaaagcaatcaaaatcaaaggatatctcatatacatggaaaataggccaatcagaaatgccgatagta gactgtgcaacacatgttggacttgacagacaacaacaagtagtagtcgataacgcaacatctaataccacatcattcac atccggggttccacaagggacagtgcttggaccgacactctttcttttcttcatcaatgtcattgcagacaacatcaact ccactataaggctctctgcagatgatagtgtcctctacagaccaatcaccaatactaacagtcaacggcagctgcgggat gaccttaaaacactcttagactggagcaagatatggcaaatggaatttaaggtaaaaaggtgtgccgtcatgcagttttc tacaacatcaaggaaacaagcattcaactacacaatggaaggagagcctctacatattgttcaccatcatccgtatatag tagaactaagtgacacattaaagtaccatctacacataaacaccatctgtaaaaaggcatcaagtgtcctgggctttctg aagcggaaccttaaacattgtccatctaaggtaaaagaaagagcataccaaatcttagttaagaccaaagctagaatata tgcaacaccaatatggaatccacagcaaaaatcacagataaaacaaattgaacaggtccagagaaatgcagcaagatttg ttaataacaagccctataagtataatccatccaaaccagatagtgtaacatctatggaaatcaatatcacttatcaaacg gcaatatgggctcgtgtccttggaggacgggccattggcatcaagaccctccatacatcggctaacaacaagcagaaagt gctaactgtggaaaatatgaacccccatgtgaagaacatggagtatgctgtgaggggcccaatagtaatcagagctggag aaattgagcaagaattgaaatctggtgttcagaagccgtttagtgatgtaatcagagctaatatcggagattgtcatgcc acaggccagaaacctctcactttcctcagacaggttgtggcactgtgcactgacccagtaaggttaatgaaggaccctaa ctacccatctgacgccaaggacagagctcaacgtatactagacagctgtgggggacatagtattgcagtcacatgtcttc ttatcaatgatctatttttcttacagggtgttcagaagccgtttcgtgatgtaatcagagctaatatcggagattgccat gccacaggccagaaacctctcactttcctcagacaggttgtggcactgtgcactgacccagtaagtttaatgaaggaccc taactacccgtctgatgccaaggacagggctcagcgtatactagacagctgtggcggacatagtattgcgcacaccaacg tcctccagcgaccacacaatgaccagccagcagccaaagaacgaccaaccagcgacctcaacgttcttatatgtgttggc aatttacttggtcgtcacttgtgtgttgaccataaaagtgaaggagtgacagggccattaggtacgatcatgaagctgat gatgactggtgaatcgggtaataaacgaggcggtgtcatgatacctatacctcaataccctctatatactgccaccatag ctgaatacaatgcttatcctatcaattattacctgaatgaagacaacaaatggtcgctggatattcctgagttacagagg gctatagacgaggcccgggcacattgtatcccacgggctctagtggtaatcaacccaggcaatcctacagtagcaagggc tatagaagaggcccatgcacactgtatcccatgggctctagtggtaatcaacctgggcaatcctacagggcaggtattat ctagagaaaacattgtagacatcatcaaatttgcaaagaaagaaaaacttttcctgatggctgatgaggtatatcaacat aacatctatgccaagggttcgtcatttcactcgtttaagaaggtgcttacagagatgggaccagagtacagtgatatgga gctagcttccttcatgtctacgtctaaaggctatatgggagagtgtggttttcgaggaggttattgtgaggtgattaacc ttgacccagatgtcaaggccatgcagatcaaatctatctcagcaaaattatgttcatccgtagccggtcaggctgccatg gatgtggtggtgaaccctcccaaagctggagaaccctcatatcaactgttcaaacaggaaaaagacacagtattgggtca gctaaaggagaaggcggggatggtgtcgtctacgtttaactccatggacagaataacatgtaacgaagtacaaggtgcta tgtatgccttcccttatatacatctgacagactcggctgtagctgaagctaagagacgcggtatggctgtggatgctatg tattgttatgaactgttggagaacacgggtatatgtgtcgtacctggatcaggatttggtcagaaacctggaacttatca ttttaggactactatcttacccagcgtagaaaagttaaaggaaatgctggacaggtttcagggctttcataaaagtttta tgcagaagtacaaatga |
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Protein
| Protein ID | pfu_aug2.0_109.1_30223.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30223.t1 MVLCLRSVYKQVKDSSLLRMCGMGLSHRHCCSNLVTKEDVVFAAELKDTILDAKTRDTKLFHKLIREQRGDVSDTTTEII VNQERYRGNDAIEIWKEHFEQLASASSDSSFDVQYTKQVEDDFYVIMDICKETPDSSKVIYTTTVDEITSAVKQLNTNKS PDAYGVTTEHVLHGVIGKLLEIILRTRLRDILDNSQNPLQRGFTAKSSPLNCALIIEEFIRESRDLKKETFVALLDAKAA FDVVNHHSLLRKLYNYGVDGSLWNLVCDFHNNAVSAVKWNGQLSDTFNVTQGVRQGGILSADLYKLYINDLLNRMQDSQI GGKVGNIPCSAPTCADDMSNLSNTEGDLQTLCNIAHDYSTMEKYKLQPTKSVVLPVNTKQSKSKDISYTWKIGQSEMPIV DCATHVGLDRQQQVVVDNATSNTTSFTSGVPQGTVLGPTLFLFFINVIADNINSTIRLSADDSVLYRPITNTNSQRQLRD DLKTLLDWSKIWQMEFKVKRCAVMQFSTTSRKQAFNYTMEGEPLHIVHHHPYIVELSDTLKYHLHINTICKKASSVLGFL KRNLKHCPSKVKERAYQILVKTKARIYATPIWNPQQKSQIKQIEQVQRNAARFVNNKPYKYNPSKPDSVTSMEINITYQT AIWARVLGGRAIGIKTLHTSANNKQKVLTVENMNPHVKNMEYAVRGPIVIRAGEIEQELKSGVQKPFSDVIRANIGDCHA TGQKPLTFLRQVVALCTDPVRLMKDPNYPSDAKDRAQRILDSCGGHSIAVTCLLINDLFFLQGVQKPFRDVIRANIGDCH ATGQKPLTFLRQVVALCTDPVSLMKDPNYPSDAKDRAQRILDSCGGHSIAHTNVLQRPHNDQPAAKERPTSDLNVLICVG NLLGRHLCVDHKSEGVTGPLGTIMKLMMTGESGNKRGGVMIPIPQYPLYTATIAEYNAYPINYYLNEDNKWSLDIPELQR AIDEARAHCIPRALVVINPGNPTVARAIEEAHAHCIPWALVVINLGNPTGQVLSRENIVDIIKFAKKEKLFLMADEVYQH NIYAKGSSFHSFKKVLTEMGPEYSDMELASFMSTSKGYMGECGFRGGYCEVINLDPDVKAMQIKSISAKLCSSVAGQAAM DVVVNPPKAGEPSYQLFKQEKDTVLGQLKEKAGMVSSTFNSMDRITCNEVQGAMYAFPYIHLTDSAVAEAKRRGMAVDAM YCYELLENTGICVVPGSGFGQKPGTYHFRTTILPSVEKLKEMLDRFQGFHKSFMQKYK |
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