Gene
| Gene Model ID | pfu_aug2.0_109.1_30224 |
|---|---|
| Locus | scaffold109.1 : 414039 ... 424197 : - |
| To GenomeBrowser | scaffold109.1:414039..424197 |
| Genes list of scaffold | scaffold109.1 |
| Synonym | pfu_aug1.0_9224.1_38879 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_109.1_30224.t1 | 2 | 1 | Ras | 7 | 68 | 1.4e-09 | 37.5 | 6.0e-08 | 0.00011 | 21.6 |
| pfu_aug2.0_109.1_30224.t1 | 1 | 1 | Miro | 7 | 92 | 2.4e-07 | 31.2 | 1.8e-10 | 3.3e-07 | 30.7 |
| pfu_aug2.0_109.1_30224.t1 | 2 | 2 | Ras | 81 | 117 | 1.4e-09 | 37.5 | 8.1e-06 | 0.015 | 14.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_109.1_30224.t1 | gi|676493367|ref|XP_009066216.1| | hypothetical protein LOTGIDRAFT_222960 [Lottia gigantea] | 9.80909e-45 |
| pfu_aug2.0_109.1_30224.t1 | gi|524889502|ref|XP_005101306.1| | PREDICTED: NF-kappa-B inhibitor-interacting Ras-like protein 1-like [Aplysia californica] | 1.00053e-42 |
| pfu_aug2.0_109.1_30224.t1 | gi|585709649|ref|XP_006824390.1| | PREDICTED: NF-kappa-B inhibitor-interacting Ras-like protein 2-like, partial [Saccoglossus kowalevskii] | 5.0e-33 |
| pfu_aug2.0_109.1_30224.t1 | gi|675866790|ref|XP_009018955.1| | hypothetical protein HELRODRAFT_81180 [Helobdella robusta] | 6.0e-32 |
| pfu_aug2.0_109.1_30224.t1 | gi|594649799|ref|XP_007173929.1| | PREDICTED: NF-kappa-B inhibitor-interacting Ras-like protein 1 isoform X1 [Balaenoptera acutorostrata scammoni] | 1.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_109.1_30224.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30224.t1 atgcctggaaagataagtaagattctagtttgtggacatgcaggggtggggaaaactgctgccattgaacagctgatata tggtaaccataccataggcatgccaatgcactctactatagaggacatctatacagctatgatagagacggacagaggtg taaaagagaaagtccggatatatgatacaggaggattggatggaatcaaggctgaactcccaagacattactttgccttt cctgacgttcatatcattgccattggtaacaaaagtgaacagcaagagacaagacaagttgactttaatacagctcaagc atgggcaaacaaggaaaaagatgtgttttacagtgcgtttatgggaagcttcagtgaagacacgacaatccttgatcgac ccgtttcaatggttaaccaatcagattacaaagcctcaaaccaagggaaaatactcctatgtagcggcccagcaaatgcg tttgactttacaactgaacttgaaggatttaccaggtaa |
|
Protein
| Protein ID | pfu_aug2.0_109.1_30224.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30224.t1 MPGKISKILVCGHAGVGKTAAIEQLIYGNHTIGMPMHSTIEDIYTAMIETDRGVKEKVRIYDTGGLDGIKAELPRHYFAF PDVHIIAIGNKSEQQETRQVDFNTAQAWANKEKDVFYSAFMGSFSEDTTILDRPVSMVNQSDYKASNQGKILLCSGPANA FDFTTELEGFTR |
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