Gene
| Gene Model ID | pfu_aug2.0_109.1_30225 |
|---|---|
| Locus | scaffold109.1 : 414039 ... 455377 : - |
| To GenomeBrowser | scaffold109.1:414039..455377 |
| Genes list of scaffold | scaffold109.1 |
| Synonym | pfu_aug1.0_5742.1_67320 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_109.1_30225.t1 | 1 | 1 | PX | 20 | 127 | 2.8e-11 | 43.2 | 1.8e-14 | 6.6e-11 | 42.0 |
| pfu_aug2.0_109.1_30225.t1 | 1 | 1 | CBM_21 | 486 | 587 | 1.9e-28 | 98.6 | 1.3e-31 | 4.8e-28 | 97.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_109.1_30225.t1 | gi|676435130|ref|XP_009047457.1| | hypothetical protein LOTGIDRAFT_138963 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_109.1_30225.t1 | gi|524877911|ref|XP_005095651.1| | PREDICTED: glycogen-binding subunit 76A-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_109.1_30225.t1 | gi|291232414|ref|XP_002736153.1| | PREDICTED: glycogen-binding subunit 76A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_109.1_30225.t1 | gi|390358182|ref|XP_003729199.1| | PREDICTED: glycogen-binding subunit 76A-like [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_109.1_30225.t1 | gi|195128115|ref|XP_002008511.1| | GI13546 [Drosophila mojavensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_109.1_30225.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30225.t1 atgaatggtgattttgtacaaagtccgtcaattctccttgctgacgtcacgggatttgtggaaaataaaaccagtaccgg aaatgattatcagtttatcatagaagtacagtggtcaaacggaactgtgcgatgtgtgaagagaacttacagggaattct taaatttcagacaattgttagttcataatgtagaggaaggggctttcttaccgaaaaaccccattctaataccaaaatta aatggaatcagatttttccggcgatatgaccgtaacttagcagaggagagggaagaagaactgcatgtctttgtttctgg tttattaaaggacaatcctatgcttggttggcagccattagtcaagcagttttttgagtcccgtgagtgtgatcctgttc cctacagaagtccgccagatggcgacagttttgaaatggatgtcatagaggatgaagaggagagaacagagacggtggat gtctacagcgacgaggaggctgatgatgcaggtttttgtttacctcggaatttatcttatgcagaggagagttacctgaa ttcttacagcgtaagtagtgcatttgtgaacacagttaacaaagagaaaagaagtttatatgacactgaagtttatttat taaacagtgcaattatggctgaaaacgaagtcgtgaaatcttgcaatgacccggtgcccctcaaggtgaagttagtacag acgcactcaaaacgtatcagttcagatgctgaaattccgtcacagaaaactaatggtgataaacttggattttacttaaa tactacagatgatttggattctgttgggtcatctagcggtaagtctaactgtagtgagttagagttggcggatacgatca atagccctgatgaatacgaccttggaaaggaggatggaggtagtgaggcgacctttggggaagccatatcgaacgctttg aaatctatggaattaaacgatcaatacgaggaagaagaagttaaaaatgagtctgttagttttgcctcaaagaggctatc gtcccctcctcctctacgcattcagattgatagagctgacgatgatagtgactcagacaaaaaagaccctttaaagggct ctcaaaaatctttgctagacagtcctttatatgaagacaaagaatttaatttcaataggacagaattaaggaaatcgtcg tcattgaaagcgacaaaaacaccaccaggaactccgagccggaagaaaatggtgcgatttgcggacgctatgggattaga tcttgaatctgtgcgacacgtactaaacaccgatgcaccccctaaaattccggcatccgcgactgccgatcttcaggtgg ggatagagaaggacagacagggtataggtagtctatatctttgctcgaaatttcaacaaccaggcgctaaagaaagcttc cttgttacagtaatgacacagaaagtgtcactagaaaacgcagtcataacggatctcacgattaccggtacagtaagagt ggcgaatgtagggtttcataaagtagtgagggtccgttatactaccaacagatggacatcatttcatgatatcatggcat cttacgtgcagaactcgtgcgacggaccgacagacagattttcgttcagcgtcgtcgcaccgtctgatttcggaatcggg tcaaggctagaatttgccatctcttattccgttggagacacagtatactgggacaacaatgatggcgagaactactgttt cgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagtgctttgccaaaagtacgccattagaa acacgtgattcttggatgcattttatatga |
|
Protein
| Protein ID | pfu_aug2.0_109.1_30225.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_109.1_30225.t1 MNGDFVQSPSILLADVTGFVENKTSTGNDYQFIIEVQWSNGTVRCVKRTYREFLNFRQLLVHNVEEGAFLPKNPILIPKL NGIRFFRRYDRNLAEEREEELHVFVSGLLKDNPMLGWQPLVKQFFESRECDPVPYRSPPDGDSFEMDVIEDEEERTETVD VYSDEEADDAGFCLPRNLSYAEESYLNSYSVSSAFVNTVNKEKRSLYDTEVYLLNSAIMAENEVVKSCNDPVPLKVKLVQ THSKRISSDAEIPSQKTNGDKLGFYLNTTDDLDSVGSSSGKSNCSELELADTINSPDEYDLGKEDGGSEATFGEAISNAL KSMELNDQYEEEEVKNESVSFASKRLSSPPPLRIQIDRADDDSDSDKKDPLKGSQKSLLDSPLYEDKEFNFNRTELRKSS SLKATKTPPGTPSRKKMVRFADAMGLDLESVRHVLNTDAPPKIPASATADLQVGIEKDRQGIGSLYLCSKFQQPGAKESF LVTVMTQKVSLENAVITDLTITGTVRVANVGFHKVVRVRYTTNRWTSFHDIMASYVQNSCDGPTDRFSFSVVAPSDFGIG SRLEFAISYSVGDTVYWDNNDGENYCFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFAKSTPLE TRDSWMHFI |
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