Gene
| Gene Model ID | pfu_aug2.0_10924.1_16437 |
|---|---|
| Locus | scaffold10924.1 : 86 ... 5287 : + |
| To GenomeBrowser | scaffold10924.1:86..5287 |
| Genes list of scaffold | scaffold10924.1 |
| Synonym | pfu_aug1.0_4534.1_01757 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| low quality protein: cad | GO:0004070 GO:0005524 GO:0006207 GO:0006543 GO:0016597 GO:0016812 GO:0046872 GO:0070409 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10924.1_16437.t1 | 1 | 1 | CPSase_sm_chain | 1 | 107 | 6.1e-36 | 122.8 | 1.8e-39 | 8.9e-36 | 122.2 |
| pfu_aug2.0_10924.1_16437.t1 | 1 | 1 | GATase | 148 | 299 | 5.3e-37 | 127.1 | 1.50001e-40 | 7.6e-37 | 126.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10924.1_16437.t1 | gi|260829359|ref|XP_002609629.1| | hypothetical protein BRAFLDRAFT_83616 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_10924.1_16437.t1 | gi|676463747|ref|XP_009056696.1| | hypothetical protein LOTGIDRAFT_190512 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_10924.1_16437.t1 | gi|585679705|ref|XP_006819567.1| | PREDICTED: LOW QUALITY PROTEIN: CAD protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_10924.1_16437.t1 | gi|556988228|ref|XP_005999305.1| | PREDICTED: CAD protein [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_10924.1_16437.t1 | gi|390361898|ref|XP_003730028.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10924.1_16437.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10924.1_16437.t1 atggttggctacccagagtccatgacggacccctcctacagaaaacagatccttatcctgacgtaccccctcatagggaa ttatgggatacctgataataaaaccgataaatacggcctccaggaatggtttgaatcggcagaaattcacacggcaggac ttataatcggggatctgtcagaaaattatagtcactggagctctgtcaagtctctctctgattggctacaggaatatgac atcccagccttgtatgggctagatacaagagctctaaccaagaaaataagagaaaatggcacaatgctgggaaagattgt ggttgatgagacagaccctgaaagcattccacttactgaccccaacaagctccatctggtggcagaagtgtccatcaaga ctcatgtacaatataacaagaatgccgacataaagatcgtggcagtggattgtgggataaaatacaatcagatacgatgc ttatgtgagagaggagcatccgtcaccgtggtaccctgggattatccaatcaaatcctccgaatatgatggattgttcat cagcaatggaccaggagatcccgagatgtgtgacaaaacgataaaaaatctacgtagcataatcaatgagtcggaaccca aacctgtattcggcatctgtctgggtcatcaactactgtcactggcagttggagctaaaacttacaagatgaagtatggt aaccgaggacacaatcaaccctgtcgctacaatggaacgatccgttgttatattaccacacagaaccatggcttcgctgt ggatgctaccactctaccagaggggtggtcaccattgttcaccaatgaaaatgacaaaactaacgaaggcattgtccacg aagtgaaacctttcttcaggtttgtgttctatagttga |
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Protein
| Protein ID | pfu_aug2.0_10924.1_16437.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10924.1_16437.t1 MVGYPESMTDPSYRKQILILTYPLIGNYGIPDNKTDKYGLQEWFESAEIHTAGLIIGDLSENYSHWSSVKSLSDWLQEYD IPALYGLDTRALTKKIRENGTMLGKIVVDETDPESIPLTDPNKLHLVAEVSIKTHVQYNKNADIKIVAVDCGIKYNQIRC LCERGASVTVVPWDYPIKSSEYDGLFISNGPGDPEMCDKTIKNLRSIINESEPKPVFGICLGHQLLSLAVGAKTYKMKYG NRGHNQPCRYNGTIRCYITTQNHGFAVDATTLPEGWSPLFTNENDKTNEGIVHEVKPFFRFVFYS |
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