Gene
| Gene Model ID | pfu_aug2.0_11.1_03375 |
|---|---|
| Locus | scaffold11.1 : 40397 ... 41695 : - |
| To GenomeBrowser | scaffold11.1:40397..41695 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | pfu_aug1.0_1010.1_29532 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03375.t1 | 2 | 1 | 7tm_1 | 42 | 67 | 2.4e-12 | 46.5 | 0.34 | 2600.0 | -2.7 |
| pfu_aug2.0_11.1_03375.t1 | 1 | 1 | 7TM_GPCR_Srw | 74 | 368 | 2.3e-14 | 53.2 | 3.7e-18 | 2.8e-14 | 52.9 |
| pfu_aug2.0_11.1_03375.t1 | 2 | 2 | 7tm_1 | 83 | 350 | 2.4e-12 | 46.5 | 3.3e-16 | 2.4e-12 | 46.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03375.t1 | gi|524866486|ref|XP_005090064.1| | PREDICTED: histamine H2 receptor-like [Aplysia californica] | 2.0e-10 |
| pfu_aug2.0_11.1_03375.t1 | gi|676455509|ref|XP_009054029.1| | hypothetical protein LOTGIDRAFT_160694 [Lottia gigantea] | 1.0e-07 |
| pfu_aug2.0_11.1_03375.t1 | gi|524892011|ref|XP_005102537.1| | PREDICTED: somatostatin receptor type 5-like [Aplysia californica] | 2.0e-07 |
| pfu_aug2.0_11.1_03375.t1 | gi|524897846|ref|XP_005105379.1| | PREDICTED: FMRFamide receptor-like [Aplysia californica] | 4.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03375.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03375.t1 atggatatgactaccgaagtaacagtttggaacgtcacgcacggattaaggaatttgagttcacctaattgtatgatatc catggcagacaacatcagctatgaacaaaacaacatcacgatctgtagaaacttgtcacaaacagtcagtacaagccaga gtcagctggattcagaatctttgattttgtctacaacaatcatttactgtgcagtagctcccgtcctggctctgatagga ttcatcggtaacctgttgtctttgttggtcattagcaaagaagatagaaaaacacaaaccgaaatatttcttttggcaat tggaggtgccgatctttcagtttgttttcttacaatggtaaaaagctttctgtattgtggacatgcccaatttcctctct tcattcagaagatatcggctaaagtaacaggttatatggcacacaatctgcttgatatagtatcaaagctggggaaaatt aatgttgtacttcttgccgtttgccgcagttttgtcatcctattcccaacaaaagatatcgtgagcaaaaagaaagcagt tggtatagtgattgttacacattctattttctttctttacgttgcttaccacatgaccatagagtatttagattatcagt cggttttcggatccaaagacctcagtggaaagttaggtcccgttgcatatgaggcatttgtaattacaaatctcgctgca cgttccttgcctagacgaatttttataagaattggatttgatgtcatgccgttgatactagtctgcataagtaacattgt tatagtcaagagtcttgctaaatcctcaaagaaaatggctcaaaatgaagcaaggaaggcacgtgattcaaagatcaatc gaacactcttttggatcacgtgctccttcattttgttatgtggtccgatggacctgtttgctgtgtttcaagccctttcg ggaagttcttttgcaccctggaaaagagttgctgtgaatgtgtttcaaatgcttcttattgtcaatcattcaatcaattt cataatctatggtctgaattttccgaaattccgagacaaattcaagagccttttaggttgtaaatga |
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Protein
| Protein ID | pfu_aug2.0_11.1_03375.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03375.t1 MDMTTEVTVWNVTHGLRNLSSPNCMISMADNISYEQNNITICRNLSQTVSTSQSQLDSESLILSTTIIYCAVAPVLALIG FIGNLLSLLVISKEDRKTQTEIFLLAIGGADLSVCFLTMVKSFLYCGHAQFPLFIQKISAKVTGYMAHNLLDIVSKLGKI NVVLLAVCRSFVILFPTKDIVSKKKAVGIVIVTHSIFFLYVAYHMTIEYLDYQSVFGSKDLSGKLGPVAYEAFVITNLAA RSLPRRIFIRIGFDVMPLILVCISNIVIVKSLAKSSKKMAQNEARKARDSKINRTLFWITCSFILLCGPMDLFAVFQALS GSSFAPWKRVAVNVFQMLLIVNHSINFIIYGLNFPKFRDKFKSLLGCK |
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