Gene
| Gene Model ID | pfu_aug2.0_11.1_03377 |
|---|---|
| Locus | scaffold11.1 : 79051 ... 101925 : - |
| To GenomeBrowser | scaffold11.1:79051..101925 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | pfu_aug1.0_4124.1_16297 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03377.t1 | 1 | 1 | Dispanin | 73 | 141 | 8.1e-19 | 66.9 | 7.1e-22 | 1.3e-18 | 66.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03377.t1 | gi|676473439|ref|XP_009059819.1| | hypothetical protein LOTGIDRAFT_234301 [Lottia gigantea] | 4.0e-14 |
| pfu_aug2.0_11.1_03377.t1 | gi|676427792|ref|XP_009045063.1| | hypothetical protein LOTGIDRAFT_237441 [Lottia gigantea] | 9.0e-13 |
| pfu_aug2.0_11.1_03377.t1 | gi|676469832|ref|XP_009058659.1| | hypothetical protein LOTGIDRAFT_163884 [Lottia gigantea] | 1.0e-11 |
| pfu_aug2.0_11.1_03377.t1 | gi|291235257|ref|XP_002737561.1| | PREDICTED: proline-rich transmembrane protein 1-like [Saccoglossus kowalevskii] | 5.0e-11 |
| pfu_aug2.0_11.1_03377.t1 | gi|676455358|ref|XP_009053979.1| | hypothetical protein LOTGIDRAFT_160626 [Lottia gigantea] | 2.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03377.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03377.t1 atgtcgatcacagaaaagaactcaaatgtcgtcgcacctgcctatggacaacaaccacagacatttgacaaacaccagta tgggtataaccaatacagcaatcctcaaggacaacagtacagtcaaccagggacaaacggacagcctggaacatacggac agccggtacctacggtggcccaaccataccctgccggcaacaacgtggttgtagccaatgtgcgtccaaagaactggtta cttcccgcaattctctccttgttttgcttctggccaacggctatatttgccattataaatgctagcagggcaaataagga agcagattatgggaacatacaggaagcagagagcaaggccaatactgcaaagaagctcatcatcatctcagtagtcatcg gaatcgtccttatagtcatctctgtcgtctatcgtattatctacacagttgtaatcctcaacagctag |
|
Protein
| Protein ID | pfu_aug2.0_11.1_03377.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03377.t1 MSITEKNSNVVAPAYGQQPQTFDKHQYGYNQYSNPQGQQYSQPGTNGQPGTYGQPVPTVAQPYPAGNNVVVANVRPKNWL LPAILSLFCFWPTAIFAIINASRANKEADYGNIQEAESKANTAKKLIIISVVIGIVLIVISVVYRIIYTVVILNS |
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