Gene
| Gene Model ID | pfu_aug2.0_11.1_03380 |
|---|---|
| Locus | scaffold11.1 : 130256 ... 134575 : + |
| To GenomeBrowser | scaffold11.1:130256..134575 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | pfu_aug1.0_501.1_50915 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03380.t1 | 2 | 1 | Fasciclin | 21 | 140 | 0.0 | 233.1 | 2.4e-39 | 1.8e-35 | 121.7 |
| pfu_aug2.0_11.1_03380.t1 | 2 | 2 | Fasciclin | 153 | 275 | 0.0 | 233.1 | 5.3e-37 | 4.0e-33 | 114.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03380.t1 | gi|524896141|ref|XP_005104548.1| | PREDICTED: transforming growth factor-beta-induced protein ig-h3-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03380.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03380.t1 atgaacgaaagttgcgccctctgtgggagtttggtggatgttctccaaaacgacggggagactagtctaatatccttaat aaagcaggccggactcgccgacgccttggccggaggtccattcaccgttttcgcaccaacgaacgctgctttcagtaagc tacctcaagccacactgaacgctctgaatgccgactctacagccctagcgaacattctcaagtatcacgtggtacaagga cgcatccataaggcagatgctaaaaatgaactcacactaacaacgctggccggaacaaaaatcagatttaatatctattc tcataataatgttgtcactgtagagggatcaaagatcaccaactttgacctgaatgctgacaatggagttgtccacgtga tcgatactgtaatgacgccacctagcggcagtattgtggatattgtggcgggaaacagcgacttcagcgaacttctcaaa cttgtgaaggaaactggtcttgtcagtgctctacaaggtgatggattaacggtatttgcaccaaccaacgctgcctttca gaaacttggacatcgtgtgttgggcaatcttgccaaaaatcaagctcttctgaaagaaattttggagtaccacgtcgtac ctcatacagaatactctaaaggtttatacaacagggaatatctcagaactctagacaagcatcatgatgtaatcagactt catacttcaagttccggtgtgatggtaaataatgctcacgtgacccaagctgatataagtgccactaatggagttgtaca cgtcatcgatcacgccattgtcccaccaagatatttactttcaaccattataggaaagaaatag |
|
Protein
| Protein ID | pfu_aug2.0_11.1_03380.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03380.t1 MNESCALCGSLVDVLQNDGETSLISLIKQAGLADALAGGPFTVFAPTNAAFSKLPQATLNALNADSTALANILKYHVVQG RIHKADAKNELTLTTLAGTKIRFNIYSHNNVVTVEGSKITNFDLNADNGVVHVIDTVMTPPSGSIVDIVAGNSDFSELLK LVKETGLVSALQGDGLTVFAPTNAAFQKLGHRVLGNLAKNQALLKEILEYHVVPHTEYSKGLYNREYLRTLDKHHDVIRL HTSSSGVMVNNAHVTQADISATNGVVHVIDHAIVPPRYLLSTIIGKK |
|