Gene
| Gene Model ID | pfu_aug2.0_11.1_03384 |
|---|---|
| Locus | scaffold11.1 : 175866 ... 188946 : - |
| To GenomeBrowser | scaffold11.1:175866..188946 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | pfu_aug1.0_77.1_50603 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cytochrome c oxidase assembly protein cox15 homolog | GO:0005739 GO:0006784 GO:0016021 GO:0016627 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03384.t2 | 1 | 1 | COX15-CtaA | 78 | 376 | 0.0 | 272.1 | 0.0 | 0.0 | 271.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03384.t2 | gi|42542907|gb|AAH66452.1| | Cox15 protein [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03384.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03384.t1 atgtctttcagcgtttgcagcacattgaaagcataccaaagaataactttaacaacaaaaaactttctgaaactgaatgg tggaataaagacacatcactctctaagtaaacaggccagtcattgtatacgacagcaaacaagaaccaagtattttccgt gtttaagattgacgacaacagaagctgcaggaaagacaatcccagcgtacgcagagaagattgtagggggatggctgata ggatgtgctggaatgtgctttggagctgtcatattaggaggtgttaccagactgacagaatcaggtttgtcaatggtaga ttggcagctaatcaaagatatgaagcccccaggaagtcagaaggaatgggaggaggagtttgagagatataagcagtatc cagagtataaatatgtatcaagccagaaggagatgaccttgtcagatttcaagtttatattttacatggagtggggacat cgaatgtggggacgaatggttggaatggtattcttagtaccagctggatttttcctttataagggctggatctccaaagc actcaaaccaaggctgctggtgcttactggattgttaggatttcagggattccttggctggtacatggtaaagagtggtt tacaggatcaacctaaggacacagatattccccgtgtcagtcagtacagactggcttcacatcttggctcggctttcctg ttatatacacttttcctttggcaaggcctcaataaattcctcccttataataaatatccatacacaaatcagatgaggaa cataagaatgggtgcgttcggcatcaaggctcttgtatttaccacagctttgtcaggagcctttgtagcagggcttgatg caggtcttacatataatagttggccaaagatggccgacagatggatcccagacgacctcttagctttagatccaaaatgg aagaatacctttgaaaatccaaccactgtgcagttcaaccataggcatttggctgagagtacagttctggcaatagctgg attttggtggatgtgtcggaaggcacccctaccccccagggctagaatggctgttaactgtttattaggaatgtccctca tacaggcaacccttggtatcaccactctcctgacatatgtacctacaccattagctgctagtcaccagtctggatcctta gtgctcctcagtatagctatttggttatgtcatgaactccgcagattgccgaagtaa |
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| Transcript ID | pfu_aug2.0_11.1_03384.t2 |
| Definition | - |
>pfu_aug2.0_11.1_03384.t2 atgtctttcagcgtttgcagcacattgaaagcataccaaagaataactttaacaacaaaaaactttctgaaactgaatgg tggaataaagacacatcactctctaagtaaacaggccagtcattgtatacgacagcaaacaagaaccaagtattttccgt gtttaagattgacgacaacagaagctgcaggaaagacaatcccagcgtacgcagagaagattgtagggggatggctgata ggatgtgctggaatgtgctttggagctgtcatattaggaggtgttaccagactgacagaatcaggtttgtcaatggtaga ttggcagctaatcaaagatatgaagcccccaggaagtcagaaggaatgggaggaggagtttgagagatataagcagtatc cagagtataaatatgtatcaagccagaaggagatgaccttgtcagatttcaagtttatattttacatggagtggggacat cgaatgtggggacgaatggttggaatggtattcttagtaccagctggatttttcctttataagggctggatctccaaagc actcaaaccaaggctgctggtgcttactggattgttaggatttcagggattccttggctggtacatggtaaagagtggtt tacaggatcaacctaaggacacagatattccccgtgtcagtcagtacagactggcttcacatcttggctcggctttcctg ttatatacacttttcctttggcaaggcctcaataaattcctcccttataataaatatccatacacaaatcagatgaggaa cataagaatgggtgcgttcggcatcaaggctcttgtatttaccacagctttgtcaggagcctttgtagcagggcttgatg caggtcttacatataatagttggccaaagatggccgacagatggatcccagacgacctcttagctttagatccaaaatgg aagaatacctttgaaaatccaaccactgtgcagttcaaccataggcatttggctgagagtacagttctggcaatagctgg attttggtggatgtgtcggaaggcacccctaccccccagggctagaatggctgttaactgtttattaggaatgtccctca tacaggttaaagcagcacattccgacttcgggatgtaa |
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Protein
| Protein ID | pfu_aug2.0_11.1_03384.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03384.t1 MSFSVCSTLKAYQRITLTTKNFLKLNGGIKTHHSLSKQASHCIRQQTRTKYFPCLRLTTTEAAGKTIPAYAEKIVGGWLI GCAGMCFGAVILGGVTRLTESGLSMVDWQLIKDMKPPGSQKEWEEEFERYKQYPEYKYVSSQKEMTLSDFKFIFYMEWGH RMWGRMVGMVFLVPAGFFLYKGWISKALKPRLLVLTGLLGFQGFLGWYMVKSGLQDQPKDTDIPRVSQYRLASHLGSAFL LYTLFLWQGLNKFLPYNKYPYTNQMRNIRMGAFGIKALVFTTALSGAFVAGLDAGLTYNSWPKMADRWIPDDLLALDPKW KNTFENPTTVQFNHRHLAESTVLAIAGFWWMCRKAPLPPRARMAVNCLLGMSLIQATLGITTLLTYVPTPLAASHQSGSL VLLSIAIWLCHELRRLPK |
|
| Protein ID | pfu_aug2.0_11.1_03384.t2 |
| Definition | - |
>pfu_aug2.0_11.1_03384.t2 MSFSVCSTLKAYQRITLTTKNFLKLNGGIKTHHSLSKQASHCIRQQTRTKYFPCLRLTTTEAAGKTIPAYAEKIVGGWLI GCAGMCFGAVILGGVTRLTESGLSMVDWQLIKDMKPPGSQKEWEEEFERYKQYPEYKYVSSQKEMTLSDFKFIFYMEWGH RMWGRMVGMVFLVPAGFFLYKGWISKALKPRLLVLTGLLGFQGFLGWYMVKSGLQDQPKDTDIPRVSQYRLASHLGSAFL LYTLFLWQGLNKFLPYNKYPYTNQMRNIRMGAFGIKALVFTTALSGAFVAGLDAGLTYNSWPKMADRWIPDDLLALDPKW KNTFENPTTVQFNHRHLAESTVLAIAGFWWMCRKAPLPPRARMAVNCLLGMSLIQVKAAHSDFGM |
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