Gene
| Gene Model ID | pfu_aug2.0_11.1_03385 |
|---|---|
| Locus | scaffold11.1 : 190817 ... 195277 : + |
| To GenomeBrowser | scaffold11.1:190817..195277 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | pfu_aug1.0_62904.1_12978 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03385.t1 | 1 | 1 | FAD_binding_2 | 5 | 50 | 2.5e-06 | 26.6 | 6.0e-09 | 4.5e-06 | 25.7 |
| pfu_aug2.0_11.1_03385.t1 | 2 | 1 | Pyr_redox_3 | 6 | 48 | 2.3e-08 | 34.3 | 4.9e-10 | 3.7e-07 | 30.4 |
| pfu_aug2.0_11.1_03385.t1 | 1 | 1 | NAD_binding_8 | 7 | 72 | 6.3e-15 | 54.9 | 2.1e-17 | 1.6e-14 | 53.6 |
| pfu_aug2.0_11.1_03385.t1 | 1 | 1 | Amino_oxidase | 12 | 467 | 0.0 | 255.0 | 0.0 | 0.0 | 251.9 |
| pfu_aug2.0_11.1_03385.t1 | 2 | 2 | Pyr_redox_3 | 210 | 259 | 2.3e-08 | 34.3 | 0.41 | 300.0 | 1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03385.t1 | gi|556977059|ref|XP_005995857.1| | PREDICTED: peroxisomal N(1)-acetyl-spermine/spermidine oxidase-like [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_11.1_03385.t1 | gi|241998702|ref|XP_002433994.1| | peroxisomal N(1)-acetyl-spermine/spermidine oxidase, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_11.1_03385.t1 | gi|162287121|ref|NP_001085163.1| | spermine oxidase [Xenopus laevis] | 0.0 |
| pfu_aug2.0_11.1_03385.t1 | gi|704156215|ref|XP_010134621.1| | PREDICTED: spermine oxidase isoform X1 [Buceros rhinoceros silvestris] | 0.0 |
| pfu_aug2.0_11.1_03385.t1 | gi|675408755|ref|XP_008932873.1| | PREDICTED: spermine oxidase isoform X1 [Manacus vitellinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03385.t1 atgagccagagggtggtgattatcggagctggggtggcgggactgagcgctgctaggactctcatggataatggcatcga tgatttcctgatagtagaggcacaagacaggatcggcggtagggtgcataccctatactcagacggaaatgtactggagt taggtgctcagtggatacacggagaggaagggaacgaggtgtttgagctggcagacaaaggcaacttgatatggaacaag gaacacggggacaaacacagcccttccggagcgtcaaagtatttgaatcatgacttctgtaagacagatgggacaataat tgatagagatatcgtaactgatacatgtcatgccttggaggacatatacacggatctgaacagctgtgatcatgtgacac atgagtaccagaatctccaagatgagtataacgccaggtttcagaagcttatagactcaaatgacctgaaaggcgacgtc acagagcagaaacgtgggatttaccggtggagaacagcgttcgagatccacgacaacgcgtgttactcgctacgtgacgt caagtgcccgtgccgctacacgccatgtgaaggcaacggtctggtagaacttcagaacgggtttcaatccgttttggaca cgatacttcaaaatgtgcccagagataaaatacttcttaacacccctgttaaaactatacactggaatcacagttctagt acttgcagaaccgaatgcgagtccggaatgtctttgatttgtgatcaagtgatcttaacgtcatcgattggttatcttaa gaaaaaccatttaactatgttcaatccaaatctccctccatcaaaacttcagactattgagaataccggatatggaagtg tgcttaaaatattcttagaatgggagatgccattttggagtgagggatttacaggaattcaattcgtatgggactgtgat atcgataatgtggaaaacagtaaaataagagaggttgattcccactggagtcatgggataactgggtttgagaagttccc aggaagcggttctattttactgggctgggtcggtgggaggcccgctgagatcgcagagagtctgtctgatgaaaacatca tagatacctgccataaactcatctctaagtttgctaaacatctgaatgttcctcgtcccaagaaagttacaagatctagt tggaacaataacagatatatatgtggggcctacagctatgtgtcaataagaaacacaacagaggactttgaagaattgtg caagccacttcactcaaccagtggtcctgtggtgcactttgctggagaggccaccagctacaaacatttctccacagttc atggtgcgtacgagtcgggaatcagggtcgccaaagaagtgacaaaacacttacaaagaacatatcggtga |
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Protein
| Protein ID | pfu_aug2.0_11.1_03385.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03385.t1 MSQRVVIIGAGVAGLSAARTLMDNGIDDFLIVEAQDRIGGRVHTLYSDGNVLELGAQWIHGEEGNEVFELADKGNLIWNK EHGDKHSPSGASKYLNHDFCKTDGTIIDRDIVTDTCHALEDIYTDLNSCDHVTHEYQNLQDEYNARFQKLIDSNDLKGDV TEQKRGIYRWRTAFEIHDNACYSLRDVKCPCRYTPCEGNGLVELQNGFQSVLDTILQNVPRDKILLNTPVKTIHWNHSSS TCRTECESGMSLICDQVILTSSIGYLKKNHLTMFNPNLPPSKLQTIENTGYGSVLKIFLEWEMPFWSEGFTGIQFVWDCD IDNVENSKIREVDSHWSHGITGFEKFPGSGSILLGWVGGRPAEIAESLSDENIIDTCHKLISKFAKHLNVPRPKKVTRSS WNNNRYICGAYSYVSIRNTTEDFEELCKPLHSTSGPVVHFAGEATSYKHFSTVHGAYESGIRVAKEVTKHLQRTYR |
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