Gene
| Gene Model ID | pfu_aug2.0_11.1_03387 |
|---|---|
| Locus | scaffold11.1 : 222037 ... 226618 : + |
| To GenomeBrowser | scaffold11.1:222037..226618 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03387.t1 | 1 | 1 | HECT | 74 | 126 | 1.1e-08 | 34.5 | 1.0e-12 | 1.5e-08 | 34.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03387.t1 | gi|736160633|ref|XP_010787263.1| | PREDICTED: G2/M phase-specific E3 ubiquitin-protein ligase-like isoform X3 [Notothenia coriiceps] | 5.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03387.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03387.t1 atgaatccatgcgatgctgtgcagcaacttccaacgttgaagcacattttccaccagagtgaagtaaaattaacggtaaa aaggttgttgcacttgttgcaaccaaagtttagcgaagcaggatcgaacaaagaaaaatatgaaaagtcagtttactctg cctttgtgaagtatgtaagggccgtagcaggtggacagcgtggtgcgctatcattagagagcattttgctcttcactaca ggaagtacttcagagcctctactaggatttcagctggcgccttcaatagaatttgcagaatgtctgtctttccttcccat tgcgaacacgtgtgttaaccgccttacattaccaagaccatcggcttttgccactttaccaggagaagcgatattatatg aattatatgattatgcgttttccaataccttctttgggatcaagtga |
|
Protein
| Protein ID | pfu_aug2.0_11.1_03387.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03387.t1 MNPCDAVQQLPTLKHIFHQSEVKLTVKRLLHLLQPKFSEAGSNKEKYEKSVYSAFVKYVRAVAGGQRGALSLESILLFTT GSTSEPLLGFQLAPSIEFAECLSFLPIANTCVNRLTLPRPSAFATLPGEAILYELYDYAFSNTFFGIK |
|