Gene
| Gene Model ID | pfu_aug2.0_11.1_03389 |
|---|---|
| Locus | scaffold11.1 : 242467 ... 256873 : + |
| To GenomeBrowser | scaffold11.1:242467..256873 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | pfu_aug1.0_8480.1_45871 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rala-binding protein 1-like | GO:0005096 GO:0005829 GO:0006810 GO:0006935 GO:0016020 GO:0017160 GO:0043087 GO:0043492 GO:0048365 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03389.t1 | 3 | 1 | RhoGAP | 374 | 435 | 7.3e-13 | 48.4 | 1.4e-16 | 1.0e-12 | 47.9 |
| pfu_aug2.0_11.1_03389.t1 | 3 | 2 | RhoGAP | 496 | 525 | 7.3e-13 | 48.4 | 0.53 | 3900.0 | -2.7 |
| pfu_aug2.0_11.1_03389.t1 | 3 | 3 | RhoGAP | 560 | 589 | 7.3e-13 | 48.4 | 0.6 | 4400.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03389.t1 | gi|676430029|ref|XP_009045793.1| | hypothetical protein LOTGIDRAFT_53545, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_11.1_03389.t1 | gi|524900510|ref|XP_005106675.1| | PREDICTED: ralA-binding protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_11.1_03389.t1 | gi|675846600|ref|XP_009008860.1| | hypothetical protein HELRODRAFT_62288 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_11.1_03389.t1 | gi|241274115|ref|XP_002406639.1| | hypothetical protein IscW_ISCW003841 [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_11.1_03389.t1 | gi|260793276|ref|XP_002591638.1| | hypothetical protein BRAFLDRAFT_80737 [Branchiostoma floridae] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03389.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03389.t1 atgattacagatatagtaagggagaaaaaacgtagtctaccagaggaatgtaaagaaattcgtaccacacaacttcctgg tttgaaaaaggagttacgtcgtttcgacagaaaaatcgatgaaaaagaagcttgctttataaaaacctcatccaccttga atgtttcaaggcaaagttacatcaacgaaagcattcgattattcgataaaagaatagataaatgtcgtcagaaatccgag tcagctatacaaatatacaaagacaaacgtgatggattgaaacagaaagtaaaatacctggagaagatgacaacagctct aaacgaggatatcaatacattacctgatcatgacattctagacatggagaaggagatgagagatgaactagagaaggctc tctctttcagcgcggatacgtatacgtgtactacagcgtttgtaccaggagagatgaatgttcaagaactagagaaaatg ataggtgaatttcatagtgtgtctatagaagaaatgaacaatatcaacataggctttgtcattatttcaataaacgctgt atctgaaacaaacgcctgggtcatattctatgaggacaattatccaaagcttattgatagtgaaggaaaagtattgaaat caatgaaaactccttgtactgatgatcttatcatatcaaatagcgggcagtttgtcctcgctgatttgtccaatctaagt gtgtcagttctgactgaagtggagaaagcagttaggacatgggacaccaaaccattatgtcccacgttcatcagtaagac agagaatgatgacatactggttacactggtggatgatggtaatgacttcaaactggtgtcgaccagccgtcgggttgtcc agcgtatgactctaacagggaaggtgctccaaacatacgaattcagggaggatggtcaaacaaggctgtttaccttaccg accaggacgacagagaacaagaacacagatatatgtgttgtcaactggctcagtaaggacagtggagaattggtcgtact acataaagatggacttgttaaacatgtttataaaggagaaggtttgaagtctgataagttctttccaggtgatgttgaat gtgatatgatccgaggggagaagctgagagtagaagcttttaggaagttgattaaggacctacctccatgtaacagactg ttactttcgtggatgatcgtacatatgacacatatcatcgagagggagaaggagaacaagatgtctctacagaatgtgtc tatagtactcagtcccaccatgcagattagccatcgagtccttaatattctcttctcatcttcatctaaactcttccagg atatagaattaaagaggtacaagcctccaatcaagccggccacgtctcgttggtctttagaactgccggataatccttct caaatggaggaagagctacaaaaacaagagtctttactgaacgctctacactcggaacttaacacgggagtcaaggacga ggagaaagaggagcaactgtgggaagtccagaggatcattactcaactaaagaggaagacantcaagccggccacgtctc gttggtctttagaactgccggataatccttctcaaatggaggaagagctacaaaaacaagagtctttactgaacgctcta cactcggaacttaacacgggggtcaaggacgaggagaaagaggagcaactgtgggaagtccagaggatcattactcaact aaagaggaagattaaactggctaaaaaggcgatggagacagctgagaaaaaacggaaagaaaaagaggaatccagaccag ctactgtcacagaggaagatgaagaactgaaactagatctgaggacaatgccagtcaaacaacatgctccgcctccacct gcacagtcaaccaatcaggctcctcagagaaactctagtcattcaatcaaagaatcagatagtgctgctgttgaaagtca tccagaaagtacagcaaaggatagtaatgacaaaaaagatggggacagagtgacacctgtgccagattatgaaaatatta atataaagaacaaggaaagtgtggtagaagagaaaactgaaccacaaggagatacaaaagtcaaagaggcagaagtagag actgctagagaacaaaatgaggatggtgagattaaagcagaaaagactgaaactgataaagataaagctgaggaagttaa ggaagcagttaccacagctgtagaaagtacagcaaatgtaataaaagcggaagattctgaagatgatgcttttgaacagc aagttgaggagatacttgagaaagaaaaaggaacagtgaaggagttcagtgaggacagtgctagtgatgcaggattaact gagaaggaggaaggtgaggaaggggtcgaggaattatcctctcagcagaaggaggctgtggaggattctgtgacagaggc agaaccaggggagagggtagaggaggtacagaaaccagggattcccaaggtggattctcaggggatcctgcagccagaga gactacaaccttaccctgtagctaacttcataccacctgtacaggtagaggtcaaacctaaagaacaggaaggttggaat tatgttgaggatgaggagatggttcaactacaagaagaggaacaatccctcaaactggaagaagaggaacttctagcaat tgagagtgagcttcggacaaagatagagacggagcgtagtgagatagagcgacttcaccaggagatagcggagctacatt acctaagacaagactccgatcaggaggaattcagttcggactcggagagcagctatgagagtgaggatgaggaggacctg caggaaatcctcaatcaactcatagctgataatgagagagacaatgcagagttgtgccaaaagattcatgaggaaagaat gatctgtcttggtgtcaaagtagagatcagaatgttacagcagaaacatctggaaaattctctatgtgccgagtccattc tagaccgggatattgtcggataa |
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Protein
| Protein ID | pfu_aug2.0_11.1_03389.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03389.t1 MITDIVREKKRSLPEECKEIRTTQLPGLKKELRRFDRKIDEKEACFIKTSSTLNVSRQSYINESIRLFDKRIDKCRQKSE SAIQIYKDKRDGLKQKVKYLEKMTTALNEDINTLPDHDILDMEKEMRDELEKALSFSADTYTCTTAFVPGEMNVQELEKM IGEFHSVSIEEMNNINIGFVIISINAVSETNAWVIFYEDNYPKLIDSEGKVLKSMKTPCTDDLIISNSGQFVLADLSNLS VSVLTEVEKAVRTWDTKPLCPTFISKTENDDILVTLVDDGNDFKLVSTSRRVVQRMTLTGKVLQTYEFREDGQTRLFTLP TRTTENKNTDICVVNWLSKDSGELVVLHKDGLVKHVYKGEGLKSDKFFPGDVECDMIRGEKLRVEAFRKLIKDLPPCNRL LLSWMIVHMTHIIEREKENKMSLQNVSIVLSPTMQISHRVLNILFSSSSKLFQDIELKRYKPPIKPATSRWSLELPDNPS QMEEELQKQESLLNALHSELNTGVKDEEKEEQLWEVQRIITQLKRKTXKPATSRWSLELPDNPSQMEEELQKQESLLNAL HSELNTGVKDEEKEEQLWEVQRIITQLKRKIKLAKKAMETAEKKRKEKEESRPATVTEEDEELKLDLRTMPVKQHAPPPP AQSTNQAPQRNSSHSIKESDSAAVESHPESTAKDSNDKKDGDRVTPVPDYENINIKNKESVVEEKTEPQGDTKVKEAEVE TAREQNEDGEIKAEKTETDKDKAEEVKEAVTTAVESTANVIKAEDSEDDAFEQQVEEILEKEKGTVKEFSEDSASDAGLT EKEEGEEGVEELSSQQKEAVEDSVTEAEPGERVEEVQKPGIPKVDSQGILQPERLQPYPVANFIPPVQVEVKPKEQEGWN YVEDEEMVQLQEEEQSLKLEEEELLAIESELRTKIETERSEIERLHQEIAELHYLRQDSDQEEFSSDSESSYESEDEEDL QEILNQLIADNERDNAELCQKIHEERMICLGVKVEIRMLQQKHLENSLCAESILDRDIVG |
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