Gene
| Gene Model ID | pfu_aug2.0_11.1_03393 |
|---|---|
| Locus | scaffold11.1 : 348475 ... 362846 : - |
| To GenomeBrowser | scaffold11.1:348475..362846 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | pfu_aug1.0_24381.1_33428 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calpain-5-like isoform x1 | GO:0005622 GO:0008234 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03393.t1 | 1 | 1 | Peptidase_C2 | 33 | 347 | 0.0 | 342.5 | 0.0 | 0.0 | 341.9 |
| pfu_aug2.0_11.1_03393.t1 | 1 | 1 | Calpain_III | 358 | 471 | 4.1e-22 | 78.3 | 4.3e-24 | 2.1e-20 | 72.8 |
| pfu_aug2.0_11.1_03393.t1 | 1 | 1 | C2 | 510 | 578 | 1.3e-08 | 34.5 | 6.0e-12 | 3.0e-08 | 33.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03393.t1 | gi|676487267|ref|XP_009064237.1| | hypothetical protein LOTGIDRAFT_235955 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_11.1_03393.t1 | gi|617401192|ref|XP_007552412.1| | PREDICTED: calpain-5 [Poecilia formosa] | 0.0 |
| pfu_aug2.0_11.1_03393.t1 | gi|410915012|ref|XP_003970981.1| | PREDICTED: calpain-5-like [Takifugu rubripes] | 0.0 |
| pfu_aug2.0_11.1_03393.t1 | gi|657743953|ref|XP_008307146.1| | PREDICTED: calpain-5 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_11.1_03393.t1 | gi|326914603|ref|XP_003203614.1| | PREDICTED: calpain-5 [Meleagris gallopavo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03393.t1 atgcctttgaaacacataataagtaacatcatgccttcggcattcaaaggacagaagttttcctctcttcggagtgactg tctctctaaaggtgttttatttgaggatccagaattcccagcaaataataaatccttgttcttcagcaaaattgacaatg atatagaatggaaaagaccaaaggaattgtgtaaagttccaaagttggtagttgagggagtgagctgtgatgatttgaat caaggagagttgggaaacacatggtttgtaacagcatgttccagtcttactttagagaagaagcttttccaaacagtcgt accagatataaaggaccaagaatgggacgaaagatccgagaagaacaaatatgctggcatatttcactttcggttctgga gatacggtgaatggatagacattgtaatagatgatagactgccaacaaaagatggaaaactgtgtttttgtcattcaaaa tcaagaaatgaattttggtcggcgctcctagaaaaggcatacgccaaattatacggagattacgaatcacttcaaaatgg taaaacagctgatgccatggtcgatttcacagggggcgtggcagaaaagatagagttatcgaaactgaatatgagagacg aagaaaacaaacttaaactttttggaaaaatgaaagaagccgtagaaaacaagtctttagttaactgcaatatacaatgt cagagaacagaagtcggaaaggaacttccacaaggtttaattcttgggcacggatacaacgtaacaaaagtattagatat aaaggtggacaaaaagcaccaaggcgctgtaggaaactccatccttaaaatggtcagactgtctaatccatggggaacaa aggaatggaatggtccgtgggctgatgattctccagaatggggtaaattgaataaaacagaatgggagaaactaggtctt aaattccagcaagaaggggaattctggatgaatttcgatgatttcttggcaaatttctccaatgtagacatatgtcactt tgtgaatacatccatcatttcgatatcaaagacctggagtgaggccatatttcacggagaatggacagtgtccggtcgta atggaggaggagacttccaatcggcgactttcttaagtaatccgcagtatcgttttgacattaatggtcccacggatcgt gtgatggtgtcactagaacaacatgacatggacgtggagcagaacaggatctacagagtgcacatacccggggacctgac gtttgtatctgaatacctgaacagtaggagtgtgtttggtattatgatcctgccccggggtagatacgttattgtcccca ccaccaaggaatctggtcagactggacagttcatgctcaggttatatacaggaagcagtgcaggcgcaaaatgtcttcta atggaatgtccgcccactggatgtccatgtagaaagaaccctacactcgtgtccaccataactgtagaaagctgtgctga gcttgaaatacctcctttgtctaaagtaaaaacaatggatccttatgttatcattaaatgtgagggagagaaggtgaaat cagaggtactaccaaatactaaaaacccttcgtatggactaaaagccacattctatagaaagaaacctgaactacccatc atagttgaggtttggaacgcaaacactctgattgatgactacattgctgaggcacgtgtagaggagcacgggtcagaaga tggtgacctaacaacacaaaaactctttggtcgtaagaaggaagcagatcaagaaaaaccgggatccatgaaagtccata ttaggtcaagtcatgatatgacttatctataa |
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Protein
| Protein ID | pfu_aug2.0_11.1_03393.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03393.t1 MPLKHIISNIMPSAFKGQKFSSLRSDCLSKGVLFEDPEFPANNKSLFFSKIDNDIEWKRPKELCKVPKLVVEGVSCDDLN QGELGNTWFVTACSSLTLEKKLFQTVVPDIKDQEWDERSEKNKYAGIFHFRFWRYGEWIDIVIDDRLPTKDGKLCFCHSK SRNEFWSALLEKAYAKLYGDYESLQNGKTADAMVDFTGGVAEKIELSKLNMRDEENKLKLFGKMKEAVENKSLVNCNIQC QRTEVGKELPQGLILGHGYNVTKVLDIKVDKKHQGAVGNSILKMVRLSNPWGTKEWNGPWADDSPEWGKLNKTEWEKLGL KFQQEGEFWMNFDDFLANFSNVDICHFVNTSIISISKTWSEAIFHGEWTVSGRNGGGDFQSATFLSNPQYRFDINGPTDR VMVSLEQHDMDVEQNRIYRVHIPGDLTFVSEYLNSRSVFGIMILPRGRYVIVPTTKESGQTGQFMLRLYTGSSAGAKCLL MECPPTGCPCRKNPTLVSTITVESCAELEIPPLSKVKTMDPYVIIKCEGEKVKSEVLPNTKNPSYGLKATFYRKKPELPI IVEVWNANTLIDDYIAEARVEEHGSEDGDLTTQKLFGRKKEADQEKPGSMKVHIRSSHDMTYL |
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