Gene
| Gene Model ID | pfu_aug2.0_11.1_03406 |
|---|---|
| Locus | scaffold11.1 : 569545 ... 608983 : - |
| To GenomeBrowser | scaffold11.1:569545..608983 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | pfu_aug1.0_148.1_57990 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03406.t1 | 1 | 1 | Ndr | 34 | 326 | 0.0 | 317.3 | 0.0 | 0.0 | 315.9 |
| pfu_aug2.0_11.1_03406.t1 | 1 | 1 | Abhydrolase_6 | 74 | 315 | 1.2e-14 | 54.8 | 2.8e-18 | 1.4e-14 | 54.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03406.t1 | gi|524890039|ref|XP_005101569.1| | PREDICTED: protein NDRG3-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_11.1_03406.t1 | gi|524890037|ref|XP_005101568.1| | PREDICTED: protein NDRG3-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_11.1_03406.t1 | gi|676472631|ref|XP_009059550.1| | hypothetical protein LOTGIDRAFT_164786 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_11.1_03406.t1 | gi|524890041|ref|XP_005101570.1| | PREDICTED: protein NDRG3-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_11.1_03406.t1 | gi|675864764|ref|XP_009017942.1| | hypothetical protein HELRODRAFT_185603 [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03406.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03406.t1 atggagaagctaactgaggtagagttatcagacatcagcgtgcaggatgtgacggcaagaaacttctcaaacaacgccac cagtatactcatacaggaggatgacattgagactccctacggaaacttccatgtagccatacaaggtgaccgctccaagg tggccatattgacattccacgacattggcttgaatcatgtgacatgtttccaaggatttttcaatttctcggaaatgcag cccatcctacgtaacttctgtgtttaccatgtgaatgcacccggccaggaggagggtgcccttcatcttaaaccagaaca cgatgcactcggtaatcccgagtctcttggaagcagatttgtgtaccctacaatggatcagctagcggaatcagtacata taaagaggtttataggatttggagtgggagccggtgccaacatacttggcagatatgctttgctccatccaaatgttgtg gactctcttgttttggtgaatcccaatgcaaccaaagctggatgggtggagtggggataccaaaagatgaactcgtggta tttatggagaggcaacatgacaagtttcacagaggactacttactgtggcattggtttggaaggaaaacacagtgggaga attatgacctggtgacagtatacagagagtacattaaatccatcaatacacataatctctccctcttcatagagtcttat ctaaaacgcacagatcttggcattgagagagatttagagcattacagagttgatgttacaaagatcaagtgtcgctgtat ggtgatcgtaggtgacgactccccacatcttgatgaagctgtagaaatgaacgccaggatggacccccaggatacagact tcttcaagattcaagactgtggtggtatgccgttagaggaacaacctggtaaagtgtgcgaggcattcagattgtttcta caaggaatgggatatgtaccaaccctaagacaaactcgcagtacagctttaaggatttccagtgaacattcaaacacaaa cagtgttttgtccagtgtggaccctgtgtgttag |
|
Protein
| Protein ID | pfu_aug2.0_11.1_03406.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03406.t1 MEKLTEVELSDISVQDVTARNFSNNATSILIQEDDIETPYGNFHVAIQGDRSKVAILTFHDIGLNHVTCFQGFFNFSEMQ PILRNFCVYHVNAPGQEEGALHLKPEHDALGNPESLGSRFVYPTMDQLAESVHIKRFIGFGVGAGANILGRYALLHPNVV DSLVLVNPNATKAGWVEWGYQKMNSWYLWRGNMTSFTEDYLLWHWFGRKTQWENYDLVTVYREYIKSINTHNLSLFIESY LKRTDLGIERDLEHYRVDVTKIKCRCMVIVGDDSPHLDEAVEMNARMDPQDTDFFKIQDCGGMPLEEQPGKVCEAFRLFL QGMGYVPTLRQTRSTALRISSEHSNTNSVLSSVDPVC |
|