Gene
| Gene Model ID | pfu_aug2.0_11.1_03416 |
|---|---|
| Locus | scaffold11.1 : 841011 ... 843883 : + |
| To GenomeBrowser | scaffold11.1:841011..843883 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03416.t1 | 2 | 1 | Ank_2 | 8 | 44 | 7.9e-19 | 67.7 | 2.1e-07 | 0.00051 | 20.3 |
| pfu_aug2.0_11.1_03416.t1 | 3 | 1 | Ank_5 | 8 | 43 | 1.2e-17 | 63.4 | 2.4e-07 | 0.0006 | 19.9 |
| pfu_aug2.0_11.1_03416.t1 | 4 | 1 | Ank_3 | 8 | 29 | 3.3e-16 | 57.7 | 0.00055 | 1.4 | 9.4 |
| pfu_aug2.0_11.1_03416.t1 | 3 | 1 | Ank_4 | 9 | 45 | 2.1e-21 | 75.8 | 7.8e-07 | 0.0019 | 18.6 |
| pfu_aug2.0_11.1_03416.t1 | 4 | 1 | Ank | 9 | 34 | 2.6e-18 | 64.8 | 1.6e-05 | 0.04 | 13.7 |
| pfu_aug2.0_11.1_03416.t1 | 4 | 2 | Ank | 35 | 72 | 2.6e-18 | 64.8 | 0.0012 | 3.0 | 7.8 |
| pfu_aug2.0_11.1_03416.t1 | 4 | 2 | Ank_3 | 35 | 70 | 3.3e-16 | 57.7 | 0.00028 | 0.7 | 10.3 |
| pfu_aug2.0_11.1_03416.t1 | 2 | 2 | Ank_2 | 54 | 127 | 7.9e-19 | 67.7 | 4.6e-15 | 1.1e-11 | 44.8 |
| pfu_aug2.0_11.1_03416.t1 | 3 | 2 | Ank_4 | 61 | 95 | 2.1e-21 | 75.8 | 6.7e-10 | 1.7e-06 | 28.3 |
| pfu_aug2.0_11.1_03416.t1 | 3 | 2 | Ank_5 | 61 | 113 | 1.2e-17 | 63.4 | 7.7e-14 | 1.9e-10 | 40.6 |
| pfu_aug2.0_11.1_03416.t1 | 4 | 3 | Ank | 74 | 104 | 2.6e-18 | 64.8 | 1.9e-12 | 4.8e-09 | 35.5 |
| pfu_aug2.0_11.1_03416.t1 | 4 | 3 | Ank_3 | 74 | 103 | 3.3e-16 | 57.7 | 2.1e-11 | 5.2e-08 | 32.3 |
| pfu_aug2.0_11.1_03416.t1 | 3 | 3 | Ank_4 | 75 | 127 | 2.1e-21 | 75.8 | 5.4e-13 | 1.3e-09 | 38.2 |
| pfu_aug2.0_11.1_03416.t1 | 4 | 4 | Ank | 108 | 127 | 2.6e-18 | 64.8 | 0.031 | 77.0 | 3.3 |
| pfu_aug2.0_11.1_03416.t1 | 4 | 4 | Ank_3 | 111 | 127 | 3.3e-16 | 57.7 | 0.48 | 1200.0 | 0.3 |
| pfu_aug2.0_11.1_03416.t1 | 3 | 3 | Ank_5 | 115 | 133 | 1.2e-17 | 63.4 | 0.79 | 1900.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03416.t1 | gi|260787863|ref|XP_002588971.1| | hypothetical protein BRAFLDRAFT_89162 [Branchiostoma floridae] | 2.00386e-43 |
| pfu_aug2.0_11.1_03416.t1 | gi|676430973|ref|XP_009046101.1| | hypothetical protein LOTGIDRAFT_171651 [Lottia gigantea] | 4.0e-27 |
| pfu_aug2.0_11.1_03416.t1 | gi|260789291|ref|XP_002589680.1| | hypothetical protein BRAFLDRAFT_100807 [Branchiostoma floridae] | 1.0e-24 |
| pfu_aug2.0_11.1_03416.t1 | gi|573874285|ref|XP_006625544.1| | PREDICTED: ankyrin repeat domain-containing protein 39-like [Lepisosteus oculatus] | 3.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03416.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03416.t1 atgaaaatgtttctttctgtacagtgtgcctgcctcagtggtgacagaactctagttacctacatgttaaagaaaggtgc tgatgtgacactaagaacaaagaatggtgattcccctttatatctggcgacatatggcattgtgaactcgggaagacccg atttatcactaatcatagagcttgtgaaagctggttgtgcagtcaacacacaaaatcataatggatacacaccactccat agggcagccagtaagggtgatgtacacgttataaaagcactgctgaaactaggagcagatccgtacatatgcagcaaatc tggtatatatccgatagacagtgctcttaatgcaggacatcatgaagctgtggaattactgcagctaaaggttaaaaacg accatgtgtgggaagtggttgacccccacactcctccccgtatagcactaggtctacaaagtccatgccggagacattta ctagaatcgtcaagaccccgtacagcgagcaggatacttagttag |
|
Protein
| Protein ID | pfu_aug2.0_11.1_03416.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03416.t1 MKMFLSVQCACLSGDRTLVTYMLKKGADVTLRTKNGDSPLYLATYGIVNSGRPDLSLIIELVKAGCAVNTQNHNGYTPLH RAASKGDVHVIKALLKLGADPYICSKSGIYPIDSALNAGHHEAVELLQLKVKNDHVWEVVDPHTPPRIALGLQSPCRRHL LESSRPRTASRILS |
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