Gene
| Gene Model ID | pfu_aug2.0_11.1_03417 |
|---|---|
| Locus | scaffold11.1 : 844511 ... 850020 : - |
| To GenomeBrowser | scaffold11.1:844511..850020 |
| Genes list of scaffold | scaffold11.1 |
| Synonym | pfu_aug1.0_4229.1_59469 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclease mitochondrial | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_11.1_03417.t1 | 1 | 1 | Endonuclease_NS | 52 | 247 | 3.64338e-44 | 150.8 | 0.0 | 5.74532e-44 | 150.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_11.1_03417.t1 | gi|260793834|ref|XP_002591915.1| | hypothetical protein BRAFLDRAFT_269073 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_11.1_03417.t1 | gi|557002058|ref|XP_006003440.1| | PREDICTED: nuclease EXOG, mitochondrial isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_11.1_03417.t1 | gi|557002056|ref|XP_006003439.1| | PREDICTED: nuclease EXOG, mitochondrial isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_11.1_03417.t1 | gi|193806172|sp|Q502K1.2|EXOG_DANRE | Nuclease EXOG, mitochondrial | 0.0 |
| pfu_aug2.0_11.1_03417.t1 | gi|63100883|gb|AAH95666.1| | LOC553454 protein, partial [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_11.1_03417.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03417.t1 atggcagtccagaccaaggccctagtgtccgttactatgggaaccatgtacttagttataatcaggcccgcaagatacca aactgggtcattgagaagatttcagcagaaaatacaaaagcggttgcagagaagtcgaaaatgtaaaaagtgtacgctgg acggacggacgacgcgctatgacaatagctcacttgagcttcactcaggcaaagcaaacaggaaaaatgtgaagttcaag ccagaccctggagtagaagaactattcaccgcatctaactcggattatttagggagcggatggtctcgtggtcacatggc ccccgctggtgacaataaacatgatgagcaacacatggcggagacgttttacctctctaacatcctgccacagaacctgg ataataatgccggattctggaacaggtttgaaatctactgcagaaaactcacggaaaaatatccaaacgtcagaatttac agcggaccactgtttatagccaaacggaatgaggaagacgggaaaaaatatgtgaagtatgaggtgattggtcaaaatga agttgcagtaccaacacacttgttcaaaatagtcattgtggaaaatgcgaaaaacaatcctgttgccatgggaacattca ttgtgcgaaatgaaccaatcagctttcagcatcacttgaaagagtttcaggtacctcttatggatttagaaagacgtgca ggagcaagatttctccccaaaatgaatgtgaatcgagttcaagacttgtgcgaagtagaaacttgtgatttaatgaagaa aacagaatttgacttatactttattggtcgacgtattaacaatgcaacaaacctgaatcaattacaaaaagcttggaacg agttatcacagaaaagcttggagcctgacgagtacataaaacggaaatacaaagaaaaatatgatgaagtatcaaaaaag gaaggtggttaa |
|
Protein
| Protein ID | pfu_aug2.0_11.1_03417.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_11.1_03417.t1 MAVQTKALVSVTMGTMYLVIIRPARYQTGSLRRFQQKIQKRLQRSRKCKKCTLDGRTTRYDNSSLELHSGKANRKNVKFK PDPGVEELFTASNSDYLGSGWSRGHMAPAGDNKHDEQHMAETFYLSNILPQNLDNNAGFWNRFEIYCRKLTEKYPNVRIY SGPLFIAKRNEEDGKKYVKYEVIGQNEVAVPTHLFKIVIVENAKNNPVAMGTFIVRNEPISFQHHLKEFQVPLMDLERRA GARFLPKMNVNRVQDLCEVETCDLMKKTEFDLYFIGRRINNATNLNQLQKAWNELSQKSLEPDEYIKRKYKEKYDEVSKK EGG |
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