Gene
| Gene Model ID | pfu_aug2.0_110.1_00250 |
|---|---|
| Locus | scaffold110.1 : 57617 ... 73755 : - |
| To GenomeBrowser | scaffold110.1:57617..73755 |
| Genes list of scaffold | scaffold110.1 |
| Synonym | pfu_aug1.0_38945.1_34090 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cleft lip and palate transmembrane protein 1-like protein | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_110.1_00250.t1 | 1 | 1 | CLPTM1 | 8 | 369 | 0.0 | 336.7 | 0.0 | 0.0 | 336.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_110.1_00250.t1 | gi|676494205|ref|XP_009066485.1| | hypothetical protein LOTGIDRAFT_108820 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_110.1_00250.t1 | gi|260787392|ref|XP_002588737.1| | hypothetical protein BRAFLDRAFT_238322 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_110.1_00250.t1 | gi|524910738|ref|XP_005110243.1| | PREDICTED: cleft lip and palate transmembrane protein 1-like protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_110.1_00250.t1 | gi|126320808|ref|XP_001363379.1| | PREDICTED: cleft lip and palate transmembrane protein 1-like protein [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_110.1_00250.t1 | gi|395510749|ref|XP_003759633.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_110.1_00250.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00250.t1 atgaggccgtcattgacgttaatattatcggccattttcctggcttatattggtcactccatgtatgtcatctacggaat attttttcctacaccatgcaaaggaggtaacaagtgtatcaaatcatacttagcgagggagccaaaattagagatttatg tgtatacaagtacaaggcgtgtgaatgtaggtcaaagtgatttaacactggtgtggcacaattcaactttacaagtatca gacgcaatagaaaagtctttcaatatatctataccctacaagacaagaaggaacggcactttatatgtacacgcctttct cgtccctaaaggaggggacccgttagtcaatgattacatggttcatcagaactgtccccttaccacatacacgtatccta aagcggaagtattcagtttgatgggagactcaagaaagaatgattccttagatccaaaccgtcccatcacacatttccgt cagaggctgactgtaaacatcatgaatgacaaactagcgttagatagaactgcattaccgggagatatctataaatacct caaaggtgcacctaatggagattacttacctatactctttatagatgaacttagcttcagaaccagagatcttgtcccaa taaccactaagaccacagagttaccattgactattgtatattcacccatatctgtgggcaagctgagattctggagtaac atgctacagtctatagagacactgcatggatttggattctctgaaaaagatacagatgagttgaaagggatttttgcaga cacaaacttttattttctgatgatgacatttgcagttgcagcttttcatcttctgtttgatttccttgccttcaaaaatg acataagctattggaggaagagagagactatggtgggactgtcaaccagagcagtgctttggaggtgtgtgtccaccatt attattttcttttacctctgggaccaagaaaccagcctgttagttcttataccagctggtataggggcccttatagaggt atggaaagtcaaaaaggcattcaaggtgtctgtttcctttgcaagtggctttccaaaatttcagaccgctagctaccaag aaaaacatcagtgttag |
|
Protein
| Protein ID | pfu_aug2.0_110.1_00250.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00250.t1 MRPSLTLILSAIFLAYIGHSMYVIYGIFFPTPCKGGNKCIKSYLAREPKLEIYVYTSTRRVNVGQSDLTLVWHNSTLQVS DAIEKSFNISIPYKTRRNGTLYVHAFLVPKGGDPLVNDYMVHQNCPLTTYTYPKAEVFSLMGDSRKNDSLDPNRPITHFR QRLTVNIMNDKLALDRTALPGDIYKYLKGAPNGDYLPILFIDELSFRTRDLVPITTKTTELPLTIVYSPISVGKLRFWSN MLQSIETLHGFGFSEKDTDELKGIFADTNFYFLMMTFAVAAFHLLFDFLAFKNDISYWRKRETMVGLSTRAVLWRCVSTI IIFFYLWDQETSLLVLIPAGIGALIEVWKVKKAFKVSVSFASGFPKFQTASYQEKHQC |
|