Gene
| Gene Model ID | pfu_aug2.0_110.1_00251 |
|---|---|
| Locus | scaffold110.1 : 74136 ... 77273 : + |
| To GenomeBrowser | scaffold110.1:74136..77273 |
| Genes list of scaffold | scaffold110.1 |
| Synonym | pfu_aug1.0_3917.1_37742 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_110.1_00251.t1 | 2 | 1 | F-box | 14 | 59 | 9.3e-09 | 34.7 | 6.6e-12 | 3.3e-08 | 32.9 |
| pfu_aug2.0_110.1_00251.t1 | 2 | 1 | F-box-like | 18 | 62 | 2.7e-10 | 39.8 | 1.2e-13 | 5.7e-10 | 38.7 |
| pfu_aug2.0_110.1_00251.t1 | 2 | 2 | F-box-like | 166 | 175 | 2.7e-10 | 39.8 | 0.92 | 4500.0 | -2.6 |
| pfu_aug2.0_110.1_00251.t1 | 2 | 2 | F-box | 191 | 201 | 9.3e-09 | 34.7 | 0.5 | 2500.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_110.1_00251.t1 | gi|676488028|ref|XP_009064484.1| | hypothetical protein LOTGIDRAFT_236076 [Lottia gigantea] | 1.0e-20 |
| pfu_aug2.0_110.1_00251.t1 | gi|390365198|ref|XP_797608.2| | PREDICTED: F-box/LRR-repeat protein 8 isoform X2 [Strongylocentrotus purpuratus] | 2.0e-19 |
| pfu_aug2.0_110.1_00251.t1 | gi|390365200|ref|XP_003730769.1| | PREDICTED: F-box/LRR-repeat protein 8 isoform X1 [Strongylocentrotus purpuratus] | 2.0e-19 |
| pfu_aug2.0_110.1_00251.t1 | gi|390344481|ref|XP_003726134.1| | PREDICTED: F-box/LRR-repeat protein 8-like [Strongylocentrotus purpuratus] | 4.0e-19 |
| pfu_aug2.0_110.1_00251.t1 | gi|156372874|ref|XP_001629260.1| | predicted protein [Nematostella vectensis] | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_110.1_00251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00251.t1 atggagacactcacatccggacatgaagaggaactgtcaagtccctggctcattttaccagaacatttaatggtgaagat actccaatatttggacatagaggataaattcagagcaactgcagtttgcacttattggcgggactgctttcaacttccgg aagtatggagaaatattcacttccggtttattctatattacaagacagagggctatatgtacgtccttaaaatgtttggc gaatattttgtcaatttatcgattgtcttcaatcaagatcgggatgaacatattgagaacgcatgcgcggttttgaatca tctgtcgacgttgaaggaaaatagcttacagagcataaacttggaactgatgggcggttctgtgtttaacgaaatgagga tgagatttatgtttgcgctcagatacttctttaacaaaaattccccgataaatgttagaaatatttcgtttaaagggatt tctcaaggatttgatgacgaaattgtagatcacattgtatcgcataagggaaacaatattgtgtcgttcagcaattggga cccagtgtgtaaggtatctccgaaaagtattctagtcttgagtaataagtgtttaagtttaacaagacttgaaatttgct attgctgtataaccgaagagtttgaactcatttgctcaaggaagcagaacgaggctttgctttcttggaatcacgtgccg tgctga |
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Protein
| Protein ID | pfu_aug2.0_110.1_00251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00251.t1 METLTSGHEEELSSPWLILPEHLMVKILQYLDIEDKFRATAVCTYWRDCFQLPEVWRNIHFRFILYYKTEGYMYVLKMFG EYFVNLSIVFNQDRDEHIENACAVLNHLSTLKENSLQSINLELMGGSVFNEMRMRFMFALRYFFNKNSPINVRNISFKGI SQGFDDEIVDHIVSHKGNNIVSFSNWDPVCKVSPKSILVLSNKCLSLTRLEICYCCITEEFELICSRKQNEALLSWNHVP C |
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