Gene
| Gene Model ID | pfu_aug2.0_110.1_00259 |
|---|---|
| Locus | scaffold110.1 : 265552 ... 288399 : + |
| To GenomeBrowser | scaffold110.1:265552..288399 |
| Genes list of scaffold | scaffold110.1 |
| Synonym | pfu_aug1.0_40106.1_34149 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_110.1_00259.t1 | 2 | 1 | BTB | 116 | 215 | 6.2e-22 | 77.6 | 2.3e-16 | 1.7e-12 | 47.2 |
| pfu_aug2.0_110.1_00259.t1 | 2 | 2 | BTB | 252 | 327 | 6.2e-22 | 77.6 | 1.4e-09 | 1.1e-05 | 25.4 |
| pfu_aug2.0_110.1_00259.t1 | 1 | 1 | BACK | 406 | 468 | 1.7e-06 | 27.8 | 8.3e-10 | 6.1e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_110.1_00259.t1 | gi|676447142|ref|XP_009051311.1| | hypothetical protein LOTGIDRAFT_92273, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_110.1_00259.t1 | gi|524901061|ref|XP_005106945.1| | PREDICTED: BTB/POZ domain-containing protein 7-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_110.1_00259.t1 | gi|260837037|ref|XP_002613512.1| | hypothetical protein BRAFLDRAFT_71875 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_110.1_00259.t1 | gi|751227058|ref|XP_011166990.1| | PREDICTED: BTB/POZ domain-containing protein 7 isoform X3 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_110.1_00259.t1 | gi|645035078|ref|XP_008209075.1| | PREDICTED: BTB/POZ domain-containing protein 7 isoform X1 [Nasonia vitripennis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_110.1_00259.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00259.t1 atgggagctaattcctcctttcccgagggttcaccgccaggtggcagagtcccaaccttttctcggctatctcacgccta cacagtgtcggacaatgacatcagcgcccgagagaaaaagaaaaaggcgtcgaagctcgcaacattgcggaagaagctca ttcgagctcgcagacatagccgatccatggattatggaaaacctatgagagatctgatatcaacttggactataagagac ataaagagtctacttcaagaatatgacgcactagcggcgctaaaagaggtgtacatcgcggcaaacttggcgcgaccatc agcgagttccttaaagcaggatttttcagacttgttcgatttcaagtactgtacagatgtggatttagtgtacaggggtg cgtgtttccccgctcatagagctttactttccgtaaggagtccgtattttagagctttattatcaaaatacccggcacac ggcgcccaggtgcccgtgaaattaaaaactttgggagtggacgtggcgctgtttgccacagtcttaaggtttctctacac agacattcttagtattgaggagttgagtcctgatcaacaggaagtgctatcgaaactcgcaaatgagttcggaattccga agccgttagaacaggatcttaaaaattcattagacaatgctgaatacagcgacgcggtcttggtgttctcatgcggcggc aactgcagcgacccgatgtcatctgacccggaagtgttttgtaaatccgttcagcacgaggtcagatgtcacaaagctgt gctcgccgcaaggtcatctttctttagaaacttacttctacgtcgtgccaaatccggtgacgaaagcacggaaagaacgt tgaacgtggcgtcaaaaattgtgttagacgaatctgtgataccgcgacgctacgctcgcgtcttgttgaacgctgtttac caagattgtgttgatttatcgctaattttacggggcagcaccagtacgtgtagtctaagtgaggtccaggccatagcgtc ggggaagggacagatgactcttatagatgaagccatggaggtttatcaaatagggcagttcctggatttcccagttctat cacagggttgtgagaacatcatagtagaactattatcattggacaacttggtagcggtgctgaattggagccaggagcca cacgggtcggtgtgggtacaccgtcaggcggtgcactacctacgggaggaatttatacaggtggcccattcccctgtact gtatgagctcagcagggactatatcaaagaaacattgagctcagacttcttacaggcaggagaactagagattctgagtg cagtgctgaaatggggagagcatgacttgataaagagattagaggaaagagagccgaatcttcttagtcataccactcac agcattagtagaaaaggcgtaaagaaacgtgatctaaatgacgaggaattacgtgacattctagcagaagttcttccatt ggtcagaattgatcatgtgatcccttataataatgagactctaaccagtgcaataaggcggggcctcgtcagcagtccac ccagtcacatgatggaagacgaggacttaggaccgcaacaaacatcgtcgtcatggatacgcaataggtccagtagcatg tacacaccaccaaggctgttcactccttactttgaagatgcaaaggctgtattagatgaccgactctcccagggtcagga catggacacaggaagggtacgaacgatacagatgtcttctatacccgatacgttatacatggtcgaggatagacattacc cacaatccctcaggagctacagccagccgagctgttctactgttgacatcattgccggcacaataccagttcctgattca aataccctgaactgtatgttacaaagagagactgagctacagaaatctactctggttcaacgtgcatactctctaccatg ttctgaccatagagccgttagctgtcaagttcagcttcgaatagttagggaatttggtctcccggactccacgatcgaag ttttacagaacagtcagagttacgtgcccttggatcctgtgcctctcccttcacatcaacacccacgccctacaagcagc aatcctccatctcttcatcattatctcatatccccatcaaaacacaaagcgtccccacccctccatcatagacatcgtca tggtaaccatcataaacctgtacagtgtgtgtcaccaaccagacctcagagagatagacccagcaaagagcctgctgtta gtccatgcagtgacggtacattaagtgacgtgatgccggacatcgccatggcgacctcctctctcagtcaggttcacatt caggacgagtttgaattagacatcggtgacgctgaagaatgtcggaaagaaaaggttctatgcccttttatgcaactcca aatgatggacaacagttttatttcatcacttcaataa |
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Protein
| Protein ID | pfu_aug2.0_110.1_00259.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00259.t1 MGANSSFPEGSPPGGRVPTFSRLSHAYTVSDNDISAREKKKKASKLATLRKKLIRARRHSRSMDYGKPMRDLISTWTIRD IKSLLQEYDALAALKEVYIAANLARPSASSLKQDFSDLFDFKYCTDVDLVYRGACFPAHRALLSVRSPYFRALLSKYPAH GAQVPVKLKTLGVDVALFATVLRFLYTDILSIEELSPDQQEVLSKLANEFGIPKPLEQDLKNSLDNAEYSDAVLVFSCGG NCSDPMSSDPEVFCKSVQHEVRCHKAVLAARSSFFRNLLLRRAKSGDESTERTLNVASKIVLDESVIPRRYARVLLNAVY QDCVDLSLILRGSTSTCSLSEVQAIASGKGQMTLIDEAMEVYQIGQFLDFPVLSQGCENIIVELLSLDNLVAVLNWSQEP HGSVWVHRQAVHYLREEFIQVAHSPVLYELSRDYIKETLSSDFLQAGELEILSAVLKWGEHDLIKRLEEREPNLLSHTTH SISRKGVKKRDLNDEELRDILAEVLPLVRIDHVIPYNNETLTSAIRRGLVSSPPSHMMEDEDLGPQQTSSSWIRNRSSSM YTPPRLFTPYFEDAKAVLDDRLSQGQDMDTGRVRTIQMSSIPDTLYMVEDRHYPQSLRSYSQPSCSTVDIIAGTIPVPDS NTLNCMLQRETELQKSTLVQRAYSLPCSDHRAVSCQVQLRIVREFGLPDSTIEVLQNSQSYVPLDPVPLPSHQHPRPTSS NPPSLHHYLISPSKHKASPPLHHRHRHGNHHKPVQCVSPTRPQRDRPSKEPAVSPCSDGTLSDVMPDIAMATSSLSQVHI QDEFELDIGDAEECRKEKVLCPFMQLQMMDNSFISSLQ |
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