Gene
| Gene Model ID | pfu_aug2.0_110.1_00260 |
|---|---|
| Locus | scaffold110.1 : 289813 ... 299951 : - |
| To GenomeBrowser | scaffold110.1:289813..299951 |
| Genes list of scaffold | scaffold110.1 |
| Synonym | pfu_aug1.0_67051.1_49050 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_110.1_00260.t1 | 7 | 1 | Kelch_3 | 65 | 86 | 1.3e-35 | 120.7 | 0.59 | 400.0 | 1.3 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 1 | Kelch_5 | 75 | 114 | 2.2e-25 | 88.1 | 6.6e-06 | 0.0044 | 16.9 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 1 | Kelch_6 | 78 | 122 | 6.0e-34 | 114.8 | 4.1e-07 | 0.00027 | 20.9 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 1 | Kelch_4 | 78 | 99 | 6.5e-32 | 109.0 | 0.0035 | 2.4 | 8.0 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 1 | Kelch_1 | 78 | 120 | 8.9e-31 | 105.1 | 2.5e-06 | 0.0017 | 17.8 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 1 | Kelch_2 | 78 | 120 | 5.9e-20 | 70.2 | 0.00049 | 0.33 | 10.8 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 1 | PQQ_3 | 81 | 114 | 4.4e-06 | 26.7 | 0.085 | 57.0 | 4.1 |
| pfu_aug2.0_110.1_00260.t1 | 7 | 2 | Kelch_3 | 87 | 134 | 1.3e-35 | 120.7 | 0.0014 | 0.93 | 9.7 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 2 | Kelch_5 | 128 | 155 | 2.2e-25 | 88.1 | 2.1e-07 | 0.00014 | 21.7 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 2 | PQQ_3 | 128 | 149 | 4.4e-06 | 26.7 | 0.084 | 57.0 | 4.1 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 2 | Kelch_4 | 134 | 183 | 6.5e-32 | 109.0 | 3.5e-05 | 0.024 | 14.4 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 2 | Kelch_6 | 135 | 176 | 6.0e-34 | 114.8 | 3.2e-06 | 0.0022 | 18.1 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 2 | Kelch_1 | 135 | 176 | 8.9e-31 | 105.1 | 1.5e-07 | 0.0001 | 21.7 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 2 | Kelch_2 | 135 | 180 | 5.9e-20 | 70.2 | 3.1e-07 | 0.00021 | 20.9 |
| pfu_aug2.0_110.1_00260.t1 | 7 | 3 | Kelch_3 | 141 | 193 | 1.3e-35 | 120.7 | 2.3e-10 | 1.6e-07 | 31.3 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 3 | Kelch_5 | 183 | 211 | 2.2e-25 | 88.1 | 6.0e-05 | 0.04 | 13.8 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 3 | Kelch_6 | 185 | 228 | 6.0e-34 | 114.8 | 1.8e-07 | 0.00012 | 22.0 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 3 | Kelch_4 | 185 | 227 | 6.5e-32 | 109.0 | 1.0e-14 | 6.8e-12 | 44.9 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 3 | Kelch_1 | 185 | 227 | 8.9e-31 | 105.1 | 5.3e-11 | 3.6e-08 | 32.8 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 3 | Kelch_2 | 185 | 227 | 5.9e-20 | 70.2 | 1.2e-05 | 0.0078 | 15.9 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 3 | PQQ_3 | 189 | 220 | 4.4e-06 | 26.7 | 0.015 | 10.0 | 6.5 |
| pfu_aug2.0_110.1_00260.t1 | 7 | 4 | Kelch_3 | 197 | 228 | 1.3e-35 | 120.7 | 2.1e-07 | 0.00014 | 21.8 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 4 | Kelch_5 | 234 | 267 | 2.2e-25 | 88.1 | 1.9e-05 | 0.013 | 15.4 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 4 | PQQ_3 | 234 | 258 | 4.4e-06 | 26.7 | 0.014 | 9.7 | 6.6 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 4 | Kelch_4 | 235 | 282 | 6.5e-32 | 109.0 | 1.1e-08 | 7.6e-06 | 25.6 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 4 | Kelch_1 | 235 | 275 | 8.9e-31 | 105.1 | 5.3e-09 | 3.5e-06 | 26.4 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 4 | Kelch_2 | 235 | 274 | 5.9e-20 | 70.2 | 1.1e-05 | 0.0072 | 16.0 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 4 | Kelch_6 | 239 | 275 | 6.0e-34 | 114.8 | 3.3e-08 | 2.2e-05 | 24.4 |
| pfu_aug2.0_110.1_00260.t1 | 7 | 5 | Kelch_3 | 245 | 282 | 1.3e-35 | 120.7 | 1.8e-08 | 1.2e-05 | 25.3 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 5 | Kelch_6 | 286 | 344 | 6.0e-34 | 114.8 | 2.9e-05 | 0.02 | 15.0 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 5 | Kelch_1 | 287 | 334 | 8.9e-31 | 105.1 | 0.24 | 160.0 | 1.9 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 5 | Kelch_4 | 291 | 334 | 6.5e-32 | 109.0 | 0.85 | 570.0 | 0.3 |
| pfu_aug2.0_110.1_00260.t1 | 7 | 6 | Kelch_3 | 293 | 351 | 1.3e-35 | 120.7 | 3.1e-05 | 0.021 | 15.0 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 5 | PQQ_3 | 330 | 355 | 4.4e-06 | 26.7 | 3.0 | 2000.0 | -0.8 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 5 | Kelch_5 | 340 | 378 | 2.2e-25 | 88.1 | 3.8e-06 | 0.0025 | 17.7 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 6 | Kelch_4 | 343 | 378 | 6.5e-32 | 109.0 | 3.1e-05 | 0.021 | 14.5 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 6 | Kelch_6 | 344 | 375 | 6.0e-34 | 114.8 | 0.0021 | 1.4 | 9.2 |
| pfu_aug2.0_110.1_00260.t1 | 6 | 6 | Kelch_1 | 349 | 376 | 8.9e-31 | 105.1 | 0.045 | 30.0 | 4.2 |
| pfu_aug2.0_110.1_00260.t1 | 5 | 5 | Kelch_2 | 349 | 373 | 5.9e-20 | 70.2 | 0.084 | 57.0 | 3.7 |
| pfu_aug2.0_110.1_00260.t1 | 7 | 7 | Kelch_3 | 357 | 379 | 1.3e-35 | 120.7 | 0.0024 | 1.6 | 8.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_110.1_00260.t1 | gi|551651175|ref|XP_005828369.1| | hypothetical protein GUITHDRAFT_164415 [Guillardia theta CCMP2712] | 0.0 |
| pfu_aug2.0_110.1_00260.t1 | gi|225447524|ref|XP_002267128.1| | PREDICTED: nitrile-specifier protein 5 [Vitis vinifera] | 0.0 |
| pfu_aug2.0_110.1_00260.t1 | gi|302759895|ref|XP_002963370.1| | hypothetical protein SELMODRAFT_79877 [Selaginella moellendorffii] | 0.0 |
| pfu_aug2.0_110.1_00260.t1 | gi|302785774|ref|XP_002974658.1| | hypothetical protein SELMODRAFT_442602 [Selaginella moellendorffii] | 0.0 |
| pfu_aug2.0_110.1_00260.t1 | gi|672153780|ref|XP_008797604.1| | PREDICTED: nitrile-specifier protein 5 [Phoenix dactylifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_110.1_00260.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00260.t1 atgccctggaagagtacgcacttcctgcttgccaccaacacccaccactgtgctaaattgacgatgtcaattcaaagaga agaagaagaagaagatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatg atgacaaaattattgaaaaaaatcttgctatatggcgagcgctggctaccacgggaatgaaccctctgggacggagtagt cacggtctagttgtaataggcaaccacgcctacgtctacggcggggaaaacaagcctcgtgtgcctatagacaataacat gaactgcttagacctgaaaagtctatcctggagcgtgtgcgaacctaaaagcaaagattacattccaagcccagttaacg cagcatcggtggcagcggtgggatccaagatttatgtgttcggtgggcgcacaggggtcgacatgggtcagggagacacg gaccagatggacgtgttcgatacgacggaactggtgtggaacagagtggagggcaaaggagataagccgtctccgagaag ctaccatgccatgacgtcatctggcaaaatgctgtatgtgtttggtggatgcggagccaagggcagaatgagcgatcttt acgcctttgatacggaaacaatcacgtgggaaaagtttcctcaaagcgaggctattgtcggaaggggaggggcggggctt gctttccacaatggaaacatctacgtagtgggtggatttgttgggaaagaagtaaatgatgtacacacattcaacataac ttccagaacctggactcagctcagttttaaaaaggatttgccgccaatcagcgtgttcggaattgctgttttgaaagata caattgttgttataaatggtgagacggatccgtccgatcaaggacatgctggggcaggtaaaatgtcaaacgtgtgttac gtacatgataccagcaaagaaacgaaaatatgggagaaactggaagtgggcggggacattccagagccaagggcgtggtt tccagcttcagtggtaaacgagaagcaggtcttaatttttggcgggaatgcagagtccaatgagagactgtctgacattt attcgttgacattggattga |
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Protein
| Protein ID | pfu_aug2.0_110.1_00260.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00260.t1 MPWKSTHFLLATNTHHCAKLTMSIQREEEEEDDDDDDDDDDDDDDDDDDDDDDDDKIIEKNLAIWRALATTGMNPLGRSS HGLVVIGNHAYVYGGENKPRVPIDNNMNCLDLKSLSWSVCEPKSKDYIPSPVNAASVAAVGSKIYVFGGRTGVDMGQGDT DQMDVFDTTELVWNRVEGKGDKPSPRSYHAMTSSGKMLYVFGGCGAKGRMSDLYAFDTETITWEKFPQSEAIVGRGGAGL AFHNGNIYVVGGFVGKEVNDVHTFNITSRTWTQLSFKKDLPPISVFGIAVLKDTIVVINGETDPSDQGHAGAGKMSNVCY VHDTSKETKIWEKLEVGGDIPEPRAWFPASVVNEKQVLIFGGNAESNERLSDIYSLTLD |
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