Gene
| Gene Model ID | pfu_aug2.0_110.1_00264 |
|---|---|
| Locus | scaffold110.1 : 394512 ... 411128 : + |
| To GenomeBrowser | scaffold110.1:394512..411128 |
| Genes list of scaffold | scaffold110.1 |
| Synonym | pfu_aug1.0_1397.1_44010 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_110.1_00264.t1 | 2 | 1 | F5_F8_type_C | 39 | 166 | 2.7e-06 | 27.2 | 1.1e-09 | 4.0e-06 | 26.6 |
| pfu_aug2.0_110.1_00264.t1 | 2 | 2 | F5_F8_type_C | 295 | 301 | 2.7e-06 | 27.2 | 1.4 | 5200.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_110.1_00264.t1 | gi|658892552|ref|XP_008429150.1| | PREDICTED: fucolectin-6-like [Poecilia reticulata] | 1.0e-08 |
| pfu_aug2.0_110.1_00264.t1 | gi|197246212|gb|AAI69185.1| | hypothetical protein LOC100135371 [Xenopus (Silurana) tropicalis] | 2.0e-08 |
| pfu_aug2.0_110.1_00264.t1 | gi|166158298|ref|NP_001107515.1| | uncharacterized protein LOC100135371 precursor [Xenopus (Silurana) tropicalis] | 2.0e-08 |
| pfu_aug2.0_110.1_00264.t1 | gi|585703935|ref|XP_006823355.1| | PREDICTED: pentraxin fusion protein-like, partial [Saccoglossus kowalevskii] | 1.0e-07 |
| pfu_aug2.0_110.1_00264.t1 | gi|194332759|ref|NP_001123677.1| | uncharacterized protein LOC100170429 precursor [Xenopus (Silurana) tropicalis] | 1.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_110.1_00264.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00264.t1 atggtctcaaaggcgtcaataatagttcatctcctgcttctggtcgaaaatatagagtgcagcattgaattggctagggg taaaccagcagagtccaatggtgctagcccattgtactggtcggcgtcaaatactgtggatggtaatactaacacgaatc tgagatgtggttcatgcctacaaacagaacaagaaaatccagcttatcttaaggtggatcttggtgatcaatatactatc aacagggttgtcatatattttgctaagtcgaggcctaagttttgccaagataactccatggacgaaggatggaaagaaag atttcagaaacgtaatatgaggagcacagtgagtgttaatacttcaaattctattttgggaacaatttgccacagagatg agacctctgcagatgaatacagaaactttaatctgttccaaaacataccgtgtaacagtacattgaccggcagatatgtc agtattgtccaatatcatgtcagccaggaatcgcatataacaaatccaattttggcagtgtgtgaattccaagtttacgg ttgcagggtcaatttctatggacaaaattgtgggagtaaatgttctgagcattgcgaagttggaaaatgtgaccctgact ttggatgtttagaatgtatcggaaggagaactaatgcagactgttcagaaacatcaagaaatgcagagcttcaggaaagc aacaatattcctataggtgcgatcgttggtggaaatataggtgccgtgattgttatcctcaccgttataatactaggaat catattgctaagaagaaatcaatataaacagaggaatgatcgatccaataccaaaatcaaattagccaatgaaacacgac agacggagcagttttacgaaacgagtcaacgaacgaatgacgaacaccagtacagcaaatgcggagatacttcttcgact tttgaacagacagaattcaccatcttcgacaaggaggccatagagaacgtatacacgaatgttaatttctaa |
|
Protein
| Protein ID | pfu_aug2.0_110.1_00264.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_110.1_00264.t1 MVSKASIIVHLLLLVENIECSIELARGKPAESNGASPLYWSASNTVDGNTNTNLRCGSCLQTEQENPAYLKVDLGDQYTI NRVVIYFAKSRPKFCQDNSMDEGWKERFQKRNMRSTVSVNTSNSILGTICHRDETSADEYRNFNLFQNIPCNSTLTGRYV SIVQYHVSQESHITNPILAVCEFQVYGCRVNFYGQNCGSKCSEHCEVGKCDPDFGCLECIGRRTNADCSETSRNAELQES NNIPIGAIVGGNIGAVIVILTVIILGIILLRRNQYKQRNDRSNTKIKLANETRQTEQFYETSQRTNDEHQYSKCGDTSST FEQTEFTIFDKEAIENVYTNVNF |
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