Gene
| Gene Model ID | pfu_aug2.0_1102.1_08165 |
|---|---|
| Locus | scaffold1102.1 : 69236 ... 79450 : + |
| To GenomeBrowser | scaffold1102.1:69236..79450 |
| Genes list of scaffold | scaffold1102.1 |
| Synonym | pfu_aug1.0_2082.1_22863 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1102.1_08165.t1 | 7 | 1 | zf-C2H2_2 | 23 | 54 | 7.2e-07 | 29.2 | 0.017 | 18.0 | 5.5 |
| pfu_aug2.0_1102.1_08165.t1 | 9 | 1 | zf-H2C2_2 | 29 | 42 | 2.5e-31 | 106.4 | 0.0018 | 1.9 | 8.9 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 1 | zf-C2H2_jaz | 31 | 54 | 8.9e-19 | 67.0 | 6.4e-06 | 0.0068 | 16.5 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 1 | zf-C2H2 | 32 | 54 | 2.9e-30 | 102.7 | 9.7e-06 | 0.01 | 16.1 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 1 | zf-C2H2_4 | 32 | 54 | 1.7e-26 | 90.5 | 0.00018 | 0.19 | 12.1 |
| pfu_aug2.0_1102.1_08165.t1 | 6 | 1 | zf-C2H2_6 | 32 | 54 | 2.5e-10 | 39.8 | 0.00026 | 0.28 | 11.1 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 1 | zf-met | 33 | 54 | 1.6e-20 | 72.5 | 3.3e-06 | 0.0034 | 17.5 |
| pfu_aug2.0_1102.1_08165.t1 | 9 | 2 | zf-H2C2_2 | 46 | 71 | 2.5e-31 | 106.4 | 5.1e-11 | 5.4e-08 | 32.7 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 2 | zf-C2H2 | 60 | 82 | 2.9e-30 | 102.7 | 7.2e-07 | 0.00076 | 19.6 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 2 | zf-C2H2_4 | 60 | 82 | 1.7e-26 | 90.5 | 2.7e-06 | 0.0029 | 17.8 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 2 | zf-met | 60 | 79 | 1.6e-20 | 72.5 | 0.037 | 39.0 | 4.6 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 2 | zf-C2H2_jaz | 60 | 79 | 8.9e-19 | 67.0 | 0.018 | 19.0 | 5.5 |
| pfu_aug2.0_1102.1_08165.t1 | 6 | 2 | zf-C2H2_6 | 60 | 71 | 2.5e-10 | 39.8 | 0.0089 | 9.4 | 6.2 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 2 | zf-C2H2_2 | 60 | 93 | 7.2e-07 | 29.2 | 0.066 | 70.0 | 3.6 |
| pfu_aug2.0_1102.1_08165.t1 | 9 | 3 | zf-H2C2_2 | 74 | 88 | 2.5e-31 | 106.4 | 2.4 | 2600.0 | -1.0 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 3 | zf-C2H2_2 | 293 | 334 | 7.2e-07 | 29.2 | 0.00012 | 0.12 | 12.4 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 3 | zf-C2H2 | 315 | 336 | 2.9e-30 | 102.7 | 0.018 | 19.0 | 5.8 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 3 | zf-C2H2_4 | 315 | 336 | 1.7e-26 | 90.5 | 0.006 | 6.3 | 7.3 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 3 | zf-met | 316 | 335 | 1.6e-20 | 72.5 | 0.00012 | 0.12 | 12.5 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 3 | zf-C2H2_jaz | 316 | 334 | 8.9e-19 | 67.0 | 0.18 | 190.0 | 2.3 |
| pfu_aug2.0_1102.1_08165.t1 | 9 | 4 | zf-H2C2_2 | 328 | 353 | 2.5e-31 | 106.4 | 1.9e-11 | 2.0e-08 | 34.1 |
| pfu_aug2.0_1102.1_08165.t1 | 6 | 3 | zf-C2H2_6 | 341 | 353 | 2.5e-10 | 39.8 | 0.005 | 5.3 | 7.0 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 4 | zf-C2H2 | 342 | 364 | 2.9e-30 | 102.7 | 8.5e-09 | 9.0e-06 | 25.7 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 4 | zf-C2H2_4 | 342 | 364 | 1.7e-26 | 90.5 | 2.6e-07 | 0.00028 | 21.0 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 4 | zf-met | 342 | 361 | 1.6e-20 | 72.5 | 3.2e-05 | 0.034 | 14.3 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 4 | zf-C2H2_jaz | 342 | 361 | 8.9e-19 | 67.0 | 7.4e-05 | 0.078 | 13.1 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 4 | zf-C2H2_2 | 342 | 362 | 7.2e-07 | 29.2 | 0.013 | 14.0 | 5.8 |
| pfu_aug2.0_1102.1_08165.t1 | 9 | 5 | zf-H2C2_2 | 356 | 385 | 2.5e-31 | 106.4 | 1.2e-06 | 0.0013 | 18.9 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 5 | zf-C2H2_2 | 370 | 396 | 7.2e-07 | 29.2 | 0.0033 | 3.5 | 7.8 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 5 | zf-C2H2 | 374 | 396 | 2.9e-30 | 102.7 | 4.1e-06 | 0.0043 | 17.3 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 5 | zf-C2H2_4 | 374 | 396 | 1.7e-26 | 90.5 | 9.0e-07 | 0.00095 | 19.3 |
| pfu_aug2.0_1102.1_08165.t1 | 6 | 4 | zf-C2H2_6 | 374 | 397 | 2.5e-10 | 39.8 | 1.2e-06 | 0.0013 | 18.5 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 5 | zf-met | 375 | 396 | 1.6e-20 | 72.5 | 4.7e-06 | 0.005 | 16.9 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 5 | zf-C2H2_jaz | 376 | 396 | 8.9e-19 | 67.0 | 1.9e-05 | 0.02 | 15.0 |
| pfu_aug2.0_1102.1_08165.t1 | 9 | 6 | zf-H2C2_2 | 389 | 396 | 2.5e-31 | 106.4 | 4.5 | 4800.0 | -1.9 |
| pfu_aug2.0_1102.1_08165.t1 | 9 | 7 | zf-H2C2_2 | 614 | 626 | 2.5e-31 | 106.4 | 0.033 | 35.0 | 4.9 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 6 | zf-C2H2_2 | 614 | 637 | 7.2e-07 | 29.2 | 0.0022 | 2.4 | 8.3 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 6 | zf-C2H2 | 615 | 637 | 2.9e-30 | 102.7 | 8.1e-08 | 8.6e-05 | 22.6 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 6 | zf-C2H2_4 | 615 | 637 | 1.7e-26 | 90.5 | 1.4e-06 | 0.0015 | 18.7 |
| pfu_aug2.0_1102.1_08165.t1 | 6 | 5 | zf-C2H2_6 | 615 | 637 | 2.5e-10 | 39.8 | 0.00071 | 0.75 | 9.7 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 6 | zf-met | 616 | 635 | 1.6e-20 | 72.5 | 3.3e-06 | 0.0035 | 17.5 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 6 | zf-C2H2_jaz | 617 | 637 | 8.9e-19 | 67.0 | 1.6e-06 | 0.0017 | 18.4 |
| pfu_aug2.0_1102.1_08165.t1 | 9 | 8 | zf-H2C2_2 | 629 | 654 | 2.5e-31 | 106.4 | 2.5e-12 | 2.7e-09 | 36.8 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 7 | zf-C2H2 | 643 | 665 | 2.9e-30 | 102.7 | 6.7e-09 | 7.1e-06 | 26.0 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 7 | zf-C2H2_4 | 643 | 665 | 1.7e-26 | 90.5 | 8.4e-07 | 0.00089 | 19.4 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 7 | zf-met | 643 | 662 | 1.6e-20 | 72.5 | 0.00012 | 0.13 | 12.4 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 7 | zf-C2H2_jaz | 643 | 662 | 8.9e-19 | 67.0 | 0.00012 | 0.12 | 12.4 |
| pfu_aug2.0_1102.1_08165.t1 | 6 | 6 | zf-C2H2_6 | 643 | 653 | 2.5e-10 | 39.8 | 0.0053 | 5.6 | 7.0 |
| pfu_aug2.0_1102.1_08165.t1 | 7 | 7 | zf-C2H2_2 | 643 | 665 | 7.2e-07 | 29.2 | 0.0072 | 7.7 | 6.7 |
| pfu_aug2.0_1102.1_08165.t1 | 9 | 9 | zf-H2C2_2 | 657 | 666 | 2.5e-31 | 106.4 | 0.84 | 890.0 | 0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1102.1_08165.t1 | gi|558188585|ref|XP_006128927.1| | PREDICTED: sal-like protein 3 isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_1102.1_08165.t1 | gi|675411875|ref|XP_008918934.1| | PREDICTED: LOW QUALITY PROTEIN: sal-like protein 3 [Manacus vitellinus] | 0.0 |
| pfu_aug2.0_1102.1_08165.t1 | gi|701293319|ref|XP_010022593.1| | PREDICTED: sal-like protein 3 [Nestor notabilis] | 0.0 |
| pfu_aug2.0_1102.1_08165.t1 | gi|694863405|ref|XP_009473665.1| | PREDICTED: sal-like protein 3 isoform X1 [Nipponia nippon] | 0.0 |
| pfu_aug2.0_1102.1_08165.t1 | gi|697491104|ref|XP_009676014.1| | PREDICTED: sal-like protein 3 isoform X1 [Struthio camelus australis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1102.1_08165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1102.1_08165.t1 atgctaaacatcgggtacagtcgtaaagcgtgcatttcgcgcattcacgtggtggagaggtcgcagtacgttagcgagga cccgttcttccgtcataaatgtcggctgtgtcacaaggtttttggcagtgatagcgcactacagatccatatccggtctc atacgggtgagagaccattcaaatgcaatatctgcggcaaccgcttcaccacacgaggaaatctgaaagttcacttcgag cgacataaggcaaagtatccacatgtcaagatgaatccacatccggttccggaacatttagacaaacttccgcacatgcc cagtatgcttggttcgtcatttccgtcgtctgtcccaccgccgatgcaccttcagaatcgaatgataaattctacaccac cgatgtctatttcatctatgatgtcatcaatttatcccgggtctgcctttggcccgagaccgcaaataccgccattttca agggcgacagaggaacgtcggtctccgaatccgaccgccatttcatcaccaacgactagtccgactctgcctcataacga ggctcagagtaaaaaaatcaaagatgacgacgcagccaatcttgccacctctcctaatagtatcagcaaagatgcagttt ctccaacccaaaaatccgaaactgcaacttcaccgaaatttcataatccgttaagctccgcactgccacatatgagtacc gctagtccttttcccatgttgtctcatataccaccggaagttccgcccccgatgctgtcttcgtcacttcctatgggacc atcgtcacgtgattcaatcttgcccactaaaatgatcagccatgatgacaatttggagaaatacatggagatcgaccgat cagaaacctctaagctacaacaactagtcgataatatagagaagaaagtatcggaccctaatcaatgtgtcatttgtcat cgcgtgttgagctgcaaaagtgcgctgcaaatgcactatagaatccatactggggagcgcccgtacaaatgtaaaatatg cggacgcgcattcacaacgaaagggaatctgaaaactcacatgggcgtccaccgcatgaagccgccgatccgtatgatgc atcaatgtccgatatgtcacaagagtttcactaatctattggtcttgcagcagcatgtccgtagccatgcaagtcttccc ggcatgccggccgtaccggaattcggaccactgaaggaaatgccgttccgcagtttcccgccccatttgaactggccgcc gcgcccgttagacttttcgttccgtgatgacaacgaaagagagttagatcttagaaagccgtcaaggaaatcagaatctt tagatgaaaaagacgatgatagcagagatgatttttatgataaagatgaacaaatggacgtcgatgatcaggaggaaaga gaaagaggaaaagaagataaaaacaaagatgatgatctaccttccggtgattctggaaccggaagtgatgaaggccgccg cagcgttgatgagaatgagaagagtattagtgcagagaatatcgatcgcccagtttctgctgcttcggatatctctgacg actcgggccgatcagtaagcccaatatcggacgaagaaagacgtaaacaatccgcgatggacttctattcncccgacgag aaggagaccgacaagcaaacgaaaatgccgctagaatctgagaatcgtcccaacgcaagcgaaagtgtagataatacgcg ggaaccatctacgaatggacattcgcacaacaccagcggaggtagcgattcgtcgccgtttctgcgacgtacaccgttga aacatcaatgtcaagtctgtcagaaaggtttttcaagcgccagcgctttgcagattcatattcgcacgcacaccggagac aaaccctttaagtgtacggtttgtggcaaggcattcactacaaaaggaaatctgaaagttcatatggggacccacatgtg gaataacagtccttcccgccgaggacgtcgtatgtcgatagaacctccatttatgcttgcgcacaaggacaatccatata tgccaggatttcatcatcgatctccgccagattttttcccgtaccagttccctccctttatgaatggagtacctccgcat aaaatgaatgagatttccgtcattcagagtttgagcgggggcatgggtgggcacttgccgccaatggggcttgcaccaga tcacatgatctcgccaaggtcaaagtcgaccgaggacgacagaaagtcagattattctaggaaaagtgaatcgaatggca atgtgacgtcaacaggtgaacttgacctcagtatgaaatcgtcatcaatgacgtcaccaggcaacaacaattcgaaaact tctcctcatagaatagatcgagggacttggtag |
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Protein
| Protein ID | pfu_aug2.0_1102.1_08165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1102.1_08165.t1 MLNIGYSRKACISRIHVVERSQYVSEDPFFRHKCRLCHKVFGSDSALQIHIRSHTGERPFKCNICGNRFTTRGNLKVHFE RHKAKYPHVKMNPHPVPEHLDKLPHMPSMLGSSFPSSVPPPMHLQNRMINSTPPMSISSMMSSIYPGSAFGPRPQIPPFS RATEERRSPNPTAISSPTTSPTLPHNEAQSKKIKDDDAANLATSPNSISKDAVSPTQKSETATSPKFHNPLSSALPHMST ASPFPMLSHIPPEVPPPMLSSSLPMGPSSRDSILPTKMISHDDNLEKYMEIDRSETSKLQQLVDNIEKKVSDPNQCVICH RVLSCKSALQMHYRIHTGERPYKCKICGRAFTTKGNLKTHMGVHRMKPPIRMMHQCPICHKSFTNLLVLQQHVRSHASLP GMPAVPEFGPLKEMPFRSFPPHLNWPPRPLDFSFRDDNERELDLRKPSRKSESLDEKDDDSRDDFYDKDEQMDVDDQEER ERGKEDKNKDDDLPSGDSGTGSDEGRRSVDENEKSISAENIDRPVSAASDISDDSGRSVSPISDEERRKQSAMDFYXPDE KETDKQTKMPLESENRPNASESVDNTREPSTNGHSHNTSGGSDSSPFLRRTPLKHQCQVCQKGFSSASALQIHIRTHTGD KPFKCTVCGKAFTTKGNLKVHMGTHMWNNSPSRRGRRMSIEPPFMLAHKDNPYMPGFHHRSPPDFFPYQFPPFMNGVPPH KMNEISVIQSLSGGMGGHLPPMGLAPDHMISPRSKSTEDDRKSDYSRKSESNGNVTSTGELDLSMKSSSMTSPGNNNSKT SPHRIDRGTW |
|