Gene
| Gene Model ID | pfu_aug2.0_1103.1_11429 |
|---|---|
| Locus | scaffold1103.1 : 1 ... 4809 : + |
| To GenomeBrowser | scaffold1103.1:1..4809 |
| Genes list of scaffold | scaffold1103.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin-conjugating enzyme e2 10-like | GO:0003824 GO:0044267 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1103.1_11429.t1 | 1 | 1 | UQ_con | 24 | 98 | 8.4e-22 | 77.1 | 1.5e-25 | 1.1e-21 | 76.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1103.1_11429.t1 | gi|695044453|ref|XP_009409978.1| | PREDICTED: ubiquitin-conjugating enzyme E2 5B-like [Musa acuminata subsp. malaccensis] | 7.0e-24 |
| pfu_aug2.0_1103.1_11429.t1 | gi|357473801|ref|XP_003607185.1| | Ubiquitin carrier protein [Medicago truncatula] | 3.0e-22 |
| pfu_aug2.0_1103.1_11429.t1 | gi|565347503|ref|XP_006340765.1| | PREDICTED: ubiquitin-conjugating enzyme E2 10-like [Solanum tuberosum] | 4.0e-22 |
| pfu_aug2.0_1103.1_11429.t1 | gi|460373401|ref|XP_004232508.1| | PREDICTED: ubiquitin-conjugating enzyme E2 10 [Solanum lycopersicum] | 4.0e-22 |
| pfu_aug2.0_1103.1_11429.t1 | gi|697117293|ref|XP_009612579.1| | PREDICTED: ubiquitin-conjugating enzyme E2 10-like [Nicotiana tomentosiformis] | 4.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_1103.1_11429.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1103.1_11429.t1 caacttcaaaaattatacgaagagataccagaagagcacggatttacagcaggaccactggatgctgacaatatggttcc agactaaggtattccacccaaacatagacaaggaggggaaaatctgtatagactttctccaggatgagtggaagccgtct tactccataggctacattttgatggcaatttgctcactcttacttgaaccaaacttggataacccaatctctgaggaagt agccgacatgtgtatgaataatccagaggaattccgcaaaatagctgaacaatggacagcagaatatgcttcctaa |
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Protein
| Protein ID | pfu_aug2.0_1103.1_11429.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1103.1_11429.t1 NFKNYTKRYQKSTDLQQDHWMLTIWFQTKVFHPNIDKEGKICIDFLQDEWKPSYSIGYILMAICSLLLEPNLDNPISEEV ADMCMNNPEEFRKIAEQWTAEYAS |
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