Gene
| Gene Model ID | pfu_aug2.0_1103.1_11432 |
|---|---|
| Locus | scaffold1103.1 : 44973 ... 56285 : - |
| To GenomeBrowser | scaffold1103.1:44973..56285 |
| Genes list of scaffold | scaffold1103.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1103.1_11432.t1 | 1 | 1 | adh_short | 97 | 228 | 6.8e-21 | 74.9 | 2.6e-24 | 1.3e-20 | 74.0 |
| pfu_aug2.0_1103.1_11432.t1 | 1 | 1 | adh_short_C2 | 98 | 240 | 3.3e-09 | 36.8 | 9.6e-13 | 4.7e-09 | 36.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1103.1_11432.t1 | gi|524890092|ref|XP_005101595.1| | PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1103.1_11432.t1 | gi|676442282|ref|XP_009049758.1| | hypothetical protein LOTGIDRAFT_65444, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1103.1_11432.t1 | gi|694851040|ref|XP_009466802.1| | PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like [Nipponia nippon] | 0.0 |
| pfu_aug2.0_1103.1_11432.t1 | gi|696993954|ref|XP_009563921.1| | PREDICTED: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like [Cuculus canorus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1103.1_11432.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1103.1_11432.t1 atgaaggtgacagagtttgttggtcttcagatgtttgagctatcctacctcgggatactggcagttctaccattttttgt ggctcagaaatacattggaggatttatattgtctgtcctgctactgattggttcttaccatgtcatcagaaaatacacgt ataaagctataggtaacaatcatggacggagtgttcttatcacaggatgtgatactggtaagtctgaaatactggacaac cttgggtttacagtgtttgcatgtgtattaaacctggatggtgaaggagcaaaaacactacaacaaagtacttcagacaa acttcacgtgatcaaagtagacgtaaccaaagatcaagatgtcaaaggagccctagactacgtcggtaaaaccatcaagc aaaatgatattggtttgtgggctgtagtgaacaatgctggtgtcaacatgacagcagatgtggatttctgtacaatggag atgtataaaagagtcgctgagatcaacttatttggaacagtgagagtcgcaaaagcttttctacccctgttgcgacttac aaaaggtcgagtagtaaacgtatcaagtgttcgaggtcgatgtgcatttcccgtagcttcagcttatagcatggctaaat atggagttgaagcattttctgataccctccgagcagaaatgttgaagtttggtgtcaaagttatagtggttgagcccagt aactatggaggagctacaggaatgctaaatgatgtatggtgtcagcaaatggagaaagatataacaagtatgtggaacga ggccagtaatgaagttagaagaacttatggtcaaaattatttacattctctctatgaagctggtaaaagcacagctaaaa caacatatcctacattaatacccgtcctggatgccatggaagatgctattgttaactgtaatcctagatacagatatctc atcagtggtggaaatacgctttatgacatttatgttgtattagctagacttaatggtattctaccagagagctggatgga ctttataatggcaaggactttactaagtggattaccacccatacagggtgtagatacagaagcaaacaaatcctaa |
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Protein
| Protein ID | pfu_aug2.0_1103.1_11432.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1103.1_11432.t1 MKVTEFVGLQMFELSYLGILAVLPFFVAQKYIGGFILSVLLLIGSYHVIRKYTYKAIGNNHGRSVLITGCDTGKSEILDN LGFTVFACVLNLDGEGAKTLQQSTSDKLHVIKVDVTKDQDVKGALDYVGKTIKQNDIGLWAVVNNAGVNMTADVDFCTME MYKRVAEINLFGTVRVAKAFLPLLRLTKGRVVNVSSVRGRCAFPVASAYSMAKYGVEAFSDTLRAEMLKFGVKVIVVEPS NYGGATGMLNDVWCQQMEKDITSMWNEASNEVRRTYGQNYLHSLYEAGKSTAKTTYPTLIPVLDAMEDAIVNCNPRYRYL ISGGNTLYDIYVVLARLNGILPESWMDFIMARTLLSGLPPIQGVDTEANKS |
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