Gene
| Gene Model ID | pfu_aug2.0_1105.1_18090 |
|---|---|
| Locus | scaffold1105.1 : 1 ... 5120 : + |
| To GenomeBrowser | scaffold1105.1:1..5120 |
| Genes list of scaffold | scaffold1105.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1105.1_18090.t1 | 2 | 1 | Mtf2_C | 132 | 139 | 1.2e-15 | 57.0 | 0.58 | 4300.0 | -2.4 |
| pfu_aug2.0_1105.1_18090.t1 | 2 | 2 | Mtf2_C | 163 | 206 | 1.2e-15 | 57.0 | 2.0e-19 | 1.5e-15 | 56.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1105.1_18090.t1 | gi|637378205|ref|XP_008123306.1| | PREDICTED: PHD finger protein 19-like, partial [Anolis carolinensis] | 2.0e-10 |
| pfu_aug2.0_1105.1_18090.t1 | gi|585649973|ref|XP_006814485.1| | PREDICTED: metal-response element-binding transcription factor 2-like [Saccoglossus kowalevskii] | 8.0e-10 |
| pfu_aug2.0_1105.1_18090.t1 | gi|637375916|ref|XP_008122906.1| | PREDICTED: PHD finger protein 19 [Anolis carolinensis] | 1.0e-09 |
| pfu_aug2.0_1105.1_18090.t1 | gi|530619654|ref|XP_005299517.1| | PREDICTED: PHD finger protein 19 isoform X1 [Chrysemys picta bellii] | 2.0e-09 |
| pfu_aug2.0_1105.1_18090.t1 | gi|530619656|ref|XP_005299518.1| | PREDICTED: PHD finger protein 19 isoform X2 [Chrysemys picta bellii] | 8.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_1105.1_18090.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1105.1_18090.t1 gtgaaagagacagcagagagtgcaccagcagtaagaccatcgtctggttttccattggatagattgataccgttcccaga taactttacaggatacaatcacccgtttaaaacggaggtagagcagcgtgaggaaagacattttgaattcaggaaaatgc agataatgaattatctatgtttgaactcggacggtgactgcttgtcccagcactccacagcatcatgttctactgacgat cccaccaaagctatccccacacctcccccctccctgtctgggggacacatatctgacctcccctaccccaccaaacaatc ggacataaaagacagcaggaagaggaaggcccctgaggacaatcctccatcctcactgaggcagagtaagaggaagagag tcagtgtcagcggacgttacggaatcgacccggatattatggatttccaatccctggacgacctacggtctttggatgag tactctgaaaagttcaaaatgggggtcaataattacaatagtacatcagatagattgaaaaaaggagagaagtacaaggt cctggggaaaagaatctctccagatggtaaagtgcattatttagtccagtgggaggggctaataactaaagataagtga |
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Protein
| Protein ID | pfu_aug2.0_1105.1_18090.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1105.1_18090.t1 VKETAESAPAVRPSSGFPLDRLIPFPDNFTGYNHPFKTEVEQREERHFEFRKMQIMNYLCLNSDGDCLSQHSTASCSTDD PTKAIPTPPPSLSGGHISDLPYPTKQSDIKDSRKRKAPEDNPPSSLRQSKRKRVSVSGRYGIDPDIMDFQSLDDLRSLDE YSEKFKMGVNNYNSTSDRLKKGEKYKVLGKRISPDGKVHYLVQWEGLITKDK |
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