Gene
| Gene Model ID | pfu_aug2.0_1105.1_18095 |
|---|---|
| Locus | scaffold1105.1 : 138493 ... 145135 : - |
| To GenomeBrowser | scaffold1105.1:138493..145135 |
| Genes list of scaffold | scaffold1105.1 |
| Synonym | pfu_aug1.0_8418.1_67856 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| paired box protein pax-6 isoform x1 | GO:0000122 GO:0000977 GO:0001745 GO:0005634 GO:0007469 GO:0007477 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1105.1_18095.t1 | 2 | 1 | PAX | 27 | 41 | 3.4e-27 | 94.6 | 1.1 | 4200.0 | -2.7 |
| pfu_aug2.0_1105.1_18095.t1 | 2 | 2 | PAX | 55 | 123 | 3.4e-27 | 94.6 | 2.6e-30 | 9.5e-27 | 93.1 |
| pfu_aug2.0_1105.1_18095.t1 | 1 | 1 | Homeobox | 223 | 279 | 3.9e-24 | 84.0 | 2.3e-27 | 8.6e-24 | 82.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1105.1_18095.t1 | gi|557771567|ref|XP_005185444.1| | PREDICTED: paired box protein Pax-6 [Musca domestica] | 0.0 |
| pfu_aug2.0_1105.1_18095.t1 | gi|751772009|ref|XP_011208384.1| | PREDICTED: paired box protein Pax-6 isoform X1 [Bactrocera dorsalis] | 0.0 |
| pfu_aug2.0_1105.1_18095.t1 | gi|194869847|ref|XP_001972533.1| | GG13831 [Drosophila erecta] | 0.0 |
| pfu_aug2.0_1105.1_18095.t1 | gi|195012799|ref|XP_001983749.1| | GH16064 [Drosophila grimshawi] | 0.0 |
| pfu_aug2.0_1105.1_18095.t1 | gi|195160623|ref|XP_002021174.1| | GL24956 [Drosophila persimilis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1105.1_18095.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1105.1_18095.t1 atggatccacttagttccgtcagtttccgtctaccttcactgccgagaactgtgatcaagtacccggatgttccgccacc tgccgccatcagtggttacgcccctcccctgaccacgcccaatcccatggttcattccagcagtccgatatgggcacctt attataacccggttgtacagctacggagaaacacgattggtggaagtaaacctaaagtggcgacacctgtcgttgtagcc aagattgaagaatacaagagagataatccaaccatatttgcctgggaaataagggataaattacttgccgatggcatatg cacacagtgcaatcttcccagtgtatcctctatcaacaggattctacgtaatagggcggcagaccgagcagccatagcat acgcccgtatagtagaacattccttcttgccgatgccctaccctcctcccgtttggcagtcccctctgtaccctataaat gaaccattatacattccatctacgtctcaaagaccgataggacctagtccagaaaagatagagacagacaaaagagagga tactatcaaagaaagaacgtcactaccagaatctacggaacaggaagtggttactgcagacgattcagacaccgaaacag acgacagtttttccagccagaaactaagacggaatagaactacattcacatctgaacaactcgacattcttgagcgagag ttcgaaaaaactcattatccgggcattaacacgagggaggaattggcgacaaaaaccaaactttcagaggcaagagtgca ggtatggttttcaaacagaagagcaaagtggcgaaggacccagcgattttcgtttcttcacaacacgaccagggctcttt tctccgcctattctcccaactcgcttgtgacgtcactggacagagaccatagtaccatactagacaggagagtgggcgta gatgacagtccgtatgataacaagtctaagtctgtacccagcatgggtagtgaacattctgcttttgatagaatatcgag tcctggggatacagattcagaaaacgtagaaaaagaataa |
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Protein
| Protein ID | pfu_aug2.0_1105.1_18095.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1105.1_18095.t1 MDPLSSVSFRLPSLPRTVIKYPDVPPPAAISGYAPPLTTPNPMVHSSSPIWAPYYNPVVQLRRNTIGGSKPKVATPVVVA KIEEYKRDNPTIFAWEIRDKLLADGICTQCNLPSVSSINRILRNRAADRAAIAYARIVEHSFLPMPYPPPVWQSPLYPIN EPLYIPSTSQRPIGPSPEKIETDKREDTIKERTSLPESTEQEVVTADDSDTETDDSFSSQKLRRNRTTFTSEQLDILERE FEKTHYPGINTREELATKTKLSEARVQVWFSNRRAKWRRTQRFSFLHNTTRALFSAYSPNSLVTSLDRDHSTILDRRVGV DDSPYDNKSKSVPSMGSEHSAFDRISSPGDTDSENVEKE |
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