Gene
| Gene Model ID | pfu_aug2.0_1105.1_18096 |
|---|---|
| Locus | scaffold1105.1 : 161718 ... 180795 : - |
| To GenomeBrowser | scaffold1105.1:161718..180795 |
| Genes list of scaffold | scaffold1105.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein phosphatase 1 regulatory subunit 42-like | GO:0005515 GO:0005856 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1105.1_18096.t3 | 2 | 1 | LRR_8 | 4 | 41 | 3.0e-11 | 42.8 | 6.0e-06 | 0.015 | 15.0 |
| pfu_aug2.0_1105.1_18096.t3 | 4 | 1 | LRR_4 | 7 | 48 | 1.0e-18 | 66.5 | 1.4e-08 | 3.5e-05 | 23.3 |
| pfu_aug2.0_1105.1_18096.t3 | 4 | 2 | LRR_4 | 30 | 70 | 1.0e-18 | 66.5 | 1.4e-11 | 3.4e-08 | 32.9 |
| pfu_aug2.0_1105.1_18096.t3 | 4 | 3 | LRR_4 | 52 | 93 | 1.0e-18 | 66.5 | 2.6e-10 | 6.5e-07 | 28.8 |
| pfu_aug2.0_1105.1_18096.t3 | 2 | 2 | LRR_8 | 52 | 107 | 3.0e-11 | 42.8 | 4.4e-11 | 1.1e-07 | 31.4 |
| pfu_aug2.0_1105.1_18096.t3 | 4 | 4 | LRR_4 | 74 | 107 | 1.0e-18 | 66.5 | 1.7e-07 | 0.00042 | 19.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1105.1_18096.t3 | gi|524883453|ref|XP_005098355.1| | PREDICTED: protein phosphatase 1 regulatory subunit 42-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1105.1_18096.t3 | gi|688614076|ref|XP_009295661.1| | PREDICTED: protein phosphatase 1 regulatory subunit 42 isoform X1 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1105.1_18096.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1105.1_18096.t1 atggtgaagttaactatggacttgatagctcggggtacatcagggtacacaaagaagaaacgagacgagtcaatgcatca gtacctacgtcgtcttactcatctttacttggaggacagaaatattgatgaagtgggagaggatttatcgttatgtcgca atttgacggtgctatatttatacgacaaccaactactgaagataccccagctccatcagaaccagaatctgacaatgctc tatctacagaataatgacattcatagaatagaaaatctggctccacttagcaggcttaataagctttatttagggggtaa ctgtataacagttatagaaggattagataagttgggaaacctacaggagctacatctggaaaatcagaggttaccacccg gagaaaaactcctgtttgatcctcgaacattacggaccataactgtgaaaaaaatatggatgcatttcaacatctgtttt attcattatttagaaattttagacggaaaagaaatcacagaaacttctcgtagatttttgcacaattggcatgcgaccag agaaacacaaaaaaagaaaagagaggagcagttacggaaaggaagtgctaatgagtttggggacgcatcattgatgaggg agttaccacctgttcacagtgcacctaagccacacaaggtcccaggttacatgatgccaggaattatgatgaaaggaatc cccaggaaacaatttgatgagattttggccagaactaccagcaatctcgccgaccataccgctgacaaaccaccagagac catcaaaactcggagcggaatactgagatcaaaattgccagatatattcggaaaaacgtttgtttcaaccttccataaac catctcttagttttgatatggataaagtcagtacgcagaaaggtcaaaattttctccttgacttaatgaatgttatagat aacacctttaaaccaatcagaattgctgttatattttgtgacaccgactttgttcatttccttcgagaccacaacgaaaa tctgatcaaatctttcataaataccacaatagatacgatgaagtccggatcctctgtcagatga |
|
| Transcript ID | pfu_aug2.0_1105.1_18096.t2 |
| Definition | - |
>pfu_aug2.0_1105.1_18096.t2 atggtgaagttaactatggacttgatagctcggggtacatcagggtacacaaagaagaaacgagacgagtcaatgcatca gtacctacgtcgtcttactcatctttacttggaggacagaaatattgatgaagtgggagaggatttatcgttatgtcgca atttgacggtgctatatttatacgacaaccaactactgaagataccccagctccatcagaaccagaatctgacaatgctc tatctacagaataatgacattcatagaatagaaaatctggctccacttagcaggcttaataagctttatttagggggtaa ctgtataacagttatagaaggattagataagttgggaaacctacaggagctacatctggaaaatcagaggttaccacccg gagaaaaactcctgtttgatcctcgaacattacggaccataactgtgaaaaaaatatggatgcatttcaacatctgtttt attcattatttagaaattttagacggaaaagaaatcacagaaacttctcgtagatttttgcacaattggcatgcgaccag agaaacacaaaaaaagaaaagagaggagcagttacggaaaggaagtgctaatgagtttggggacgcatcattgatgaggg agttaccacctgttcacagtgcacctaagccacacaaggtcccaggttacatgatgccaggaatccccaggaaacaattt gatgagattttggccagaactaccagcaatctcgccgaccataccgctgacaaaccaccagagaccatcaaaactcggag cggaatactgagatcaaaattgccagatatattcggaaaaacgtttgtttcaaccttccataaaccatctcttagttttg atatggataaagtcagtacgcagaaaggtcaaaattttctccttgacttaatgaatgttatagataacacctttaaacca atcagaattgctgttatattttgtgacaccgactttgttcatttccttcgagaccacaacgaaaatctgatcaaatcttt cataaataccacaatagatacgatgaagtccggatcctctgtcagatga |
|
| Transcript ID | pfu_aug2.0_1105.1_18096.t3 |
| Definition | - |
>pfu_aug2.0_1105.1_18096.t3 atgcatcagtacctacgtcgtcttactcatctttacttggaggacagaaatattgatgaagtgggagaggatttatcgtt atgtcgcaatttgacggtgctatatttatacgacaaccaactactgaagataccccagctccatcagaaccagaatctga caatgctctatctacagaataatgacattcatagaatagaaaatctggctccacttagcaggcttaataagctttattta gggggtaactgtataacagttatagaaggattagataagttgggaaacctacaggagctacatctggaaaatcagaggtt accacccggagaaaaactcctgtttgatcctcgaacattacggaccataactgtgaaaaaaatatggatgcatttcaaca tctgttttattcattatttagaaattttagacggaaaagaaatcacagaaacttctcgtagatttttgcacaattggcat gcgaccagagaaacacaaaaaaagaaaagagaggagcagttacggaaaggaagtgctaatgagtttggggacgcatcatt gatgagggagttaccacctgttcacagtgcacctaagccacacaaggtcccaggttacatgatgccaggtcaaataaaac caggaattatgatgaaaggaatccccaggaaacaatttgatgagattttggccagaactaccagcaatctcgccgaccat accgctgacaaaccaccagagaccatcaaaactcggagcggaatactgagatcaaaattgccagatatattcggaaaaac gtttgtttcaaccttccataaaccatctcttagttttgatatggataaagtcagtacgcagaaaggtcaaaattttctcc ttgacttaatgaatgttatagataacacctttaaaccaatcagaattgctgttatattttgtgacaccgactttgttcat ttccttcgagaccacaacgaaaatctgatcaaatctttcataaataccacaatagatacgatgaagtccggatcctctgt cagatga |
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Protein
| Protein ID | pfu_aug2.0_1105.1_18096.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1105.1_18096.t1 MVKLTMDLIARGTSGYTKKKRDESMHQYLRRLTHLYLEDRNIDEVGEDLSLCRNLTVLYLYDNQLLKIPQLHQNQNLTML YLQNNDIHRIENLAPLSRLNKLYLGGNCITVIEGLDKLGNLQELHLENQRLPPGEKLLFDPRTLRTITVKKIWMHFNICF IHYLEILDGKEITETSRRFLHNWHATRETQKKKREEQLRKGSANEFGDASLMRELPPVHSAPKPHKVPGYMMPGIMMKGI PRKQFDEILARTTSNLADHTADKPPETIKTRSGILRSKLPDIFGKTFVSTFHKPSLSFDMDKVSTQKGQNFLLDLMNVID NTFKPIRIAVIFCDTDFVHFLRDHNENLIKSFINTTIDTMKSGSSVR |
|
| Protein ID | pfu_aug2.0_1105.1_18096.t2 |
| Definition | - |
>pfu_aug2.0_1105.1_18096.t2 MVKLTMDLIARGTSGYTKKKRDESMHQYLRRLTHLYLEDRNIDEVGEDLSLCRNLTVLYLYDNQLLKIPQLHQNQNLTML YLQNNDIHRIENLAPLSRLNKLYLGGNCITVIEGLDKLGNLQELHLENQRLPPGEKLLFDPRTLRTITVKKIWMHFNICF IHYLEILDGKEITETSRRFLHNWHATRETQKKKREEQLRKGSANEFGDASLMRELPPVHSAPKPHKVPGYMMPGIPRKQF DEILARTTSNLADHTADKPPETIKTRSGILRSKLPDIFGKTFVSTFHKPSLSFDMDKVSTQKGQNFLLDLMNVIDNTFKP IRIAVIFCDTDFVHFLRDHNENLIKSFINTTIDTMKSGSSVR |
|
| Protein ID | pfu_aug2.0_1105.1_18096.t3 |
| Definition | - |
>pfu_aug2.0_1105.1_18096.t3 MHQYLRRLTHLYLEDRNIDEVGEDLSLCRNLTVLYLYDNQLLKIPQLHQNQNLTMLYLQNNDIHRIENLAPLSRLNKLYL GGNCITVIEGLDKLGNLQELHLENQRLPPGEKLLFDPRTLRTITVKKIWMHFNICFIHYLEILDGKEITETSRRFLHNWH ATRETQKKKREEQLRKGSANEFGDASLMRELPPVHSAPKPHKVPGYMMPGQIKPGIMMKGIPRKQFDEILARTTSNLADH TADKPPETIKTRSGILRSKLPDIFGKTFVSTFHKPSLSFDMDKVSTQKGQNFLLDLMNVIDNTFKPIRIAVIFCDTDFVH FLRDHNENLIKSFINTTIDTMKSGSSVR |
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