Gene
| Gene Model ID | pfu_aug2.0_1105.1_18097 |
|---|---|
| Locus | scaffold1105.1 : 183196 ... 191691 : + |
| To GenomeBrowser | scaffold1105.1:183196..191691 |
| Genes list of scaffold | scaffold1105.1 |
| Synonym | pfu_aug1.0_32926.1_55445 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1105.1_18097.t2 | 1 | 1 | RVT_1 | 25 | 110 | 1.3e-06 | 27.9 | 1.5e-10 | 2.3e-06 | 27.1 |
Transcript
| Transcript ID | pfu_aug2.0_1105.1_18097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1105.1_18097.t1 atggataggggacttcctccacggtcgaatcaagcaagtacatgtactcctggaaggagtgaagtccaacctgtgtttct ccaagggagtgtcctaggactgctgcttttcctgctgtttattaatgacctacctgaggcaatatccaggggatcagtgg tacacatgtttgcagacaactgtgcactttatcatattaggagtgagacagatgccatacacttacaagaagaccttgac aacctgaagatctggaagggagactggatgatggaattccatcccaagaagtgtcaagtcttgaatatcacagccaagag gaagattatccatcatccctatgaaatccatggacataccctcgagtttgtggattcagccaagaatctccatctaagcc atcggagtacaaagatccagtgctaccagacacccgtgagactactgatcaaatacgccagtgttgtatgggaatatcct ctcaccaatgacaacaccacaaagatagagatggttcaacacagagctgctcgtatggtcaactctaactacaggacaac aagcattgtcacaaagatgctcagtcagctggaatggccgaccatacaggagcgcaaggcccaggctaagaatgatttac cttctgttaatatgtttacgggcggagtggacctatatctacgggcggagtggacctactacgggccgagtgttccacgg tatggacttattgaaggaaataaagataagtttaacctatacacaattagtatacccctgaagaggacccagaaacccca gccctgttatctgacgtcctgggatagctcatcattccaatcaaaaggaaatcaaactacgggtacagaggtcctgtcca gcctagcagtcagtgatgatggtatatatgtggcagtggggactatatcaggcagtgtaggcgtgtatatctcatttagt ctacagaaactatactacgtaaaggagatccatagtatatttgtgacgggtctggcgttcatgccgagttcggaggcagc acgttctgtaacaggaaaccaagactttacattgatgagtatatctgcagacaataccatacgtgttcaccaagtagctc ctagagaatcagaagtgaataatgattttatcatttataatatggctgnagacaataccatacgtgttcaccaagtagct cctagagcctcctacaacatcttggttgtgatagcaatggtgattgtggttgtaatgttgatattttacgcgatatctga ggcaggagtatag |
|
| Transcript ID | pfu_aug2.0_1105.1_18097.t2 |
| Definition | - |
>pfu_aug2.0_1105.1_18097.t2 atggataggggacttcctccacggtcgaatcaagcaagtacatgtactcctggaaggagtgaagtccaacctgtgtttct ccaagggagtgtcctaggactgctgcttttcctgctgtttattaatgacctacctgaggcaatatccaggggatcagtgg tacacatgtttgcagacaactgtgcactttatcatattaggagtgagacagatgccatacacttacaagaagaccttgac aacctgaagatctggaagggagactggatgatggaattccatcccaagaagtgtcaagtcttgaatatcacagccaagag gaagattatccatcatccctatgaaatccatggacataccctcgagtttgtggattcagccaagaatctccatctaagcc atcggagtacaaagatccagtgctaccagacacccgtgagactactgatcaaatacgccagtgttgtatgggaatatcct ctcaccaatgacaacaccacaaagatagagatggttcaacacagagctgctcgtatggtcaactctaactacaggacaac aagcattgtcacaaagatgctcagtcagctggaatggccgaccatacaggagcgcaaggcccaggctaaggtcatcatgc tatttggagcgttgaaccatctcatcttcataccagcagacaaagtccttgtacctaccatctcaccaaggggcaataac agcagcttcctggtgccatatgcaaggacactttaa |
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Protein
| Protein ID | pfu_aug2.0_1105.1_18097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1105.1_18097.t1 MDRGLPPRSNQASTCTPGRSEVQPVFLQGSVLGLLLFLLFINDLPEAISRGSVVHMFADNCALYHIRSETDAIHLQEDLD NLKIWKGDWMMEFHPKKCQVLNITAKRKIIHHPYEIHGHTLEFVDSAKNLHLSHRSTKIQCYQTPVRLLIKYASVVWEYP LTNDNTTKIEMVQHRAARMVNSNYRTTSIVTKMLSQLEWPTIQERKAQAKNDLPSVNMFTGGVDLYLRAEWTYYGPSVPR YGLIEGNKDKFNLYTISIPLKRTQKPQPCYLTSWDSSSFQSKGNQTTGTEVLSSLAVSDDGIYVAVGTISGSVGVYISFS LQKLYYVKEIHSIFVTGLAFMPSSEAARSVTGNQDFTLMSISADNTIRVHQVAPRESEVNNDFIIYNMAXDNTIRVHQVA PRASYNILVVIAMVIVVVMLIFYAISEAGV |
|
| Protein ID | pfu_aug2.0_1105.1_18097.t2 |
| Definition | - |
>pfu_aug2.0_1105.1_18097.t2 MDRGLPPRSNQASTCTPGRSEVQPVFLQGSVLGLLLFLLFINDLPEAISRGSVVHMFADNCALYHIRSETDAIHLQEDLD NLKIWKGDWMMEFHPKKCQVLNITAKRKIIHHPYEIHGHTLEFVDSAKNLHLSHRSTKIQCYQTPVRLLIKYASVVWEYP LTNDNTTKIEMVQHRAARMVNSNYRTTSIVTKMLSQLEWPTIQERKAQAKVIMLFGALNHLIFIPADKVLVPTISPRGNN SSFLVPYARTL |
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