Gene
| Gene Model ID | pfu_aug2.0_1108.1_28058 |
|---|---|
| Locus | scaffold1108.1 : 26030 ... 27195 : - |
| To GenomeBrowser | scaffold1108.1:26030..27195 |
| Genes list of scaffold | scaffold1108.1 |
| Synonym | pfu_aug1.0_24801.1_19033 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1108.1_28058.t1 | 2 | 1 | HLH | 64 | 71 | 1.6e-15 | 56.5 | 1.0 | 5200.0 | -2.8 |
| pfu_aug2.0_1108.1_28058.t1 | 2 | 2 | HLH | 104 | 155 | 1.6e-15 | 56.5 | 6.5e-19 | 3.2e-15 | 55.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1108.1_28058.t1 | gi|242007238|ref|XP_002424449.1| | protein lin-32, putative [Pediculus humanus corporis] | 2.0e-25 |
| pfu_aug2.0_1108.1_28058.t1 | gi|573897036|ref|XP_006636256.1| | PREDICTED: fer3-like protein-like [Lepisosteus oculatus] | 4.0e-25 |
| pfu_aug2.0_1108.1_28058.t1 | gi|528508884|ref|XP_005170045.1| | PREDICTED: fer3-like protein [Danio rerio] | 5.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_1108.1_28058.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1108.1_28058.t1 atgggtacagattatctatctgaatttcaatcttttcaaaccggtgattttaatgagctgctggaatatacagccttttt atttaacgaagacacgggagaaagtagctcatctaactttgaagcatgtctggcggaggaggtgacctttgagaggattc cgcaataccatgattctatgagaccagagttaatgacactgagaacagcaaccaataataaccaagaagaaagagaaaca gccaatcaagtatcgagaacttgtgctgaaaatttgaaaccgaaaaggaagcgagttcaaacagtatcacaacgaaaagc tgccaacgtaagagaacggaggaggatggtgacgttgaataaagcctttgacgatctgagaaaaagactcccagctttcg actacgaaaagaaactgtcaagaatagaaactctaagactagcaatcacgtatatatcttttatgaagggattagaaaag gaaaattag |
|
Protein
| Protein ID | pfu_aug2.0_1108.1_28058.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1108.1_28058.t1 MGTDYLSEFQSFQTGDFNELLEYTAFLFNEDTGESSSSNFEACLAEEVTFERIPQYHDSMRPELMTLRTATNNNQEERET ANQVSRTCAENLKPKRKRVQTVSQRKAANVRERRRMVTLNKAFDDLRKRLPAFDYEKKLSRIETLRLAITYISFMKGLEK EN |
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