Gene
| Gene Model ID | pfu_aug2.0_1108.1_28061 |
|---|---|
| Locus | scaffold1108.1 : 87176 ... 95531 : + |
| To GenomeBrowser | scaffold1108.1:87176..95531 |
| Genes list of scaffold | scaffold1108.1 |
| Synonym | pfu_aug1.0_83647.1_71211 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1108.1_28061.t1 | 1 | 1 | zf-UBR | 85 | 153 | 3.4e-18 | 65.1 | 3.6e-22 | 5.4e-18 | 64.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1108.1_28061.t1 | gi|662197593|ref|XP_008471882.1| | PREDICTED: E3 ubiquitin-protein ligase UBR3 [Diaphorina citri] | 0.0 |
| pfu_aug2.0_1108.1_28061.t1 | gi|751221375|ref|XP_011163867.1| | PREDICTED: E3 ubiquitin-protein ligase UBR3-like, partial [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_1108.1_28061.t1 | gi|749731950|ref|XP_011137596.1| | PREDICTED: E3 ubiquitin-protein ligase UBR3 isoform X3 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_1108.1_28061.t1 | gi|749731948|ref|XP_011137588.1| | PREDICTED: E3 ubiquitin-protein ligase UBR3 isoform X2 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_1108.1_28061.t1 | gi|749731946|ref|XP_011137582.1| | PREDICTED: E3 ubiquitin-protein ligase UBR3 isoform X1 [Harpegnathos saltator] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1108.1_28061.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1108.1_28061.t1 atggctgctccaagtgaagtgacagctctgttgaaaagggggaaaaggagcgtggcaagctatttcaaagcagaatggtc acgtaaatcagggagtcacaagtcctttaaagaatttatggactatttgtttgatcctcgacgaaaatcaatcgacgatg ttgaaactattgactggtgtagatggctgattgcaggtggttcaacttacgatgaatattcaaagacagtgcggagtttc gacaatgctgtgacctgtgggctggtgtggacggctaattttgtggcgtacagatgccgtacctgcggaatctctccgtg catgtcgctatgctccgattgtttccagggcggtaatcacgaaggtcatgactttaacatgtttcggagtcaggctggag gggcgtgtgattgtggggacgtcagtgttatgaataaagctggattttgttcccgccatggaccagacagacaatgctgt cacctggccccgcccactgaccttttgaccattgccgaggcgatgatgccacgaatcctgctgagattattacatcattt tcgggatagcaccaagtctaccgtatacagagacacgttcagtttggcgatggatgatgcagaacacttccttacctttc tacacagtctcagcgatatgggagcagccatgcggaaagtcatcggactggcacttactgaccaaatgtcgtataagttc ctaactgaagtggaagaaatgccggatttttcaaactcttatttcgtggaaagtcagaagaattatctgatagagaggaa aaacatggccatacccaagaaggacgatgatcataaaggtacagtatcacccgaaaaattggacagaaaactgcatcaat gcgtgtag |
|
Protein
| Protein ID | pfu_aug2.0_1108.1_28061.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1108.1_28061.t1 MAAPSEVTALLKRGKRSVASYFKAEWSRKSGSHKSFKEFMDYLFDPRRKSIDDVETIDWCRWLIAGGSTYDEYSKTVRSF DNAVTCGLVWTANFVAYRCRTCGISPCMSLCSDCFQGGNHEGHDFNMFRSQAGGACDCGDVSVMNKAGFCSRHGPDRQCC HLAPPTDLLTIAEAMMPRILLRLLHHFRDSTKSTVYRDTFSLAMDDAEHFLTFLHSLSDMGAAMRKVIGLALTDQMSYKF LTEVEEMPDFSNSYFVESQKNYLIERKNMAIPKKDDDHKGTVSPEKLDRKLHQCV |
|