Gene
| Gene Model ID | pfu_aug2.0_1109.1_31440 |
|---|---|
| Locus | scaffold1109.1 : 11196 ... 17778 : + |
| To GenomeBrowser | scaffold1109.1:11196..17778 |
| Genes list of scaffold | scaffold1109.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1109.1_31440.t1 | 1 | 1 | adh_short | 5 | 190 | 3.1e-18 | 66.2 | 2.4e-21 | 7.1e-18 | 65.0 |
| pfu_aug2.0_1109.1_31440.t1 | 1 | 1 | KR | 5 | 95 | 1.5e-07 | 31.2 | 7.1e-11 | 2.1e-07 | 30.7 |
| pfu_aug2.0_1109.1_31440.t1 | 1 | 1 | adh_short_C2 | 11 | 218 | 3.1e-14 | 53.3 | 3.0e-17 | 8.9e-14 | 51.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1109.1_31440.t1 | gi|676487116|ref|XP_009064190.1| | hypothetical protein LOTGIDRAFT_131045 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1109.1_31440.t1 | gi|524891456|ref|XP_005102261.1| | PREDICTED: uncharacterized oxidoreductase C663.09c-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1109.1_31440.t1 | gi|573911050|ref|XP_006643243.1| | PREDICTED: uncharacterized oxidoreductase C24B10.20-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_1109.1_31440.t1 | gi|157422922|gb|AAI53476.1| | Zgc:65997 [Danio rerio] | 0.0 |
| pfu_aug2.0_1109.1_31440.t1 | gi|41054635|ref|NP_956847.1| | uncharacterized protein LOC794398 [Danio rerio] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1109.1_31440.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1109.1_31440.t1 atgtcatttataacgcttatacaaggagctagtagggggatagggctacagttttgtcgatctctcttggccagagatcc tggagctgttgtcatagcaacctgcagaaatcctgatggagccacagatctaaaagaactacagtcaaaggagtcaaatc gtctacatgtttgcaaactagatattacaaatgaacagcaaatagtatcaacatctgaatttgtcaaagaaaattttgga aagcttgacttacttataaacagtgctggcttgctccatccttctggtaaaggggagacaagtctaagagatgtatcaat ggaggctttgactttaacaatgcagacaaacacattcggtcctttattgatggggaaatactttggaccatttcttacca aaggatcaggatctgtaggtgtgcagtcctcagatcccaaacaaaggcacacagcagtgttagtgaatatgtcggctaaa gtgggatctatcacagacaatggtctaggaggatggtacagctataggatgtccaaatctgctctcaacatggccacaaa gaatctcagtatagaattaggacgtggcaaaaacaaagtcatctgtgtatctctacatcctggtactgttgaaacagatc tctctagaccgtatcataaaaacgtccaaaacctcttctccacagaatactctgtaaattgtttacttagtgttatagac agtttgactgtagcagatacgggtaaatttttgacatatgatagaactgtgatggcatattga |
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Protein
| Protein ID | pfu_aug2.0_1109.1_31440.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1109.1_31440.t1 MSFITLIQGASRGIGLQFCRSLLARDPGAVVIATCRNPDGATDLKELQSKESNRLHVCKLDITNEQQIVSTSEFVKENFG KLDLLINSAGLLHPSGKGETSLRDVSMEALTLTMQTNTFGPLLMGKYFGPFLTKGSGSVGVQSSDPKQRHTAVLVNMSAK VGSITDNGLGGWYSYRMSKSALNMATKNLSIELGRGKNKVICVSLHPGTVETDLSRPYHKNVQNLFSTEYSVNCLLSVID SLTVADTGKFLTYDRTVMAY |
|