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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1109.1_31441
Locus scaffold1109.1 : 19028 ... 24695 : -
To GenomeBrowser scaffold1109.1:19028..24695
Genes list of scaffold scaffold1109.1
Synonym pfu_aug1.0_84300.1_63925

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1109.1_31441.t1 1 1 CECR6_TMEM121 90 278 3.50002e-41 140.9 1.26117e-44 6.20005e-41 140.1

Transcript
Transcript IDpfu_aug2.0_1109.1_31441.t1
Definition-
>pfu_aug2.0_1109.1_31441.t1
atggcgaactgttttgtcagatgttgccgtaaggtgaaacacttacctacaggtttactcctctttctggtctttgtaat
acaggcagcaactctgaactattacctttcccactacaagggcatggcctggttggcttttattggtgctgacgtaattg
cattggcattctacgtcgttgcctttgttgtgtctgctcggataatgcgtcaccagaaaatgtggcagacgtcacaaacg
aacatttcagaagctaatccggctggatttctagcatggttggtgttctctatagtactatcggttaaagctgccgttct
ctttaaagatgtatcgtatctgctagacgaggacatgttcttcggcccgaacactctcaaaacggcccttgccttagccg
gagtgttgttccttctgcttttgtcatctctacatgatgcaaagccaggcacagagagaaagcgttacatagaggaatta
accgggactgttatatttgatattttagacggagttgacagtatggaaatattattcatcaaagaggacagagatgattt
ccctcctggcttggaggacaccattattgccatagcttgtataaactttattttaccgacaatccctttgctcacattga
acaggacaaaatatggacttgccaaaatgtctcagaaactggttatgattcataaaatctgccttgcctttgctgtgaat
ctaccgttgctgataacgaggatgattctatggcatggacttaatcacggagtgtctatattttcgctgaaaaatattat
cgtaatggcaatgatttcttatgatttctacgaacatcacgaagttgaagaagaaagagaagagagaggaaataaaggag
aaggcaacgggaaggaaaatggaaaaacaaatgaagatgtgccggatatttcactgagagggcatgctgagtgtgataat
agttacatagaagatggttag

Protein
Protein IDpfu_aug2.0_1109.1_31441.t1
Definition-
>pfu_aug2.0_1109.1_31441.t1
MANCFVRCCRKVKHLPTGLLLFLVFVIQAATLNYYLSHYKGMAWLAFIGADVIALAFYVVAFVVSARIMRHQKMWQTSQT
NISEANPAGFLAWLVFSIVLSVKAAVLFKDVSYLLDEDMFFGPNTLKTALALAGVLFLLLLSSLHDAKPGTERKRYIEEL
TGTVIFDILDGVDSMEILFIKEDRDDFPPGLEDTIIAIACINFILPTIPLLTLNRTKYGLAKMSQKLVMIHKICLAFAVN
LPLLITRMILWHGLNHGVSIFSLKNIIVMAMISYDFYEHHEVEEEREERGNKGEGNGKENGKTNEDVPDISLRGHAECDN
SYIEDG

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