Gene
| Gene Model ID | pfu_aug2.0_1109.1_31443 |
|---|---|
| Locus | scaffold1109.1 : 59599 ... 84175 : - |
| To GenomeBrowser | scaffold1109.1:59599..84175 |
| Genes list of scaffold | scaffold1109.1 |
| Synonym | pfu_aug1.0_8368.1_45848 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1109.1_31443.t1 | 5 | 1 | Coatomer_WDAD | 637 | 664 | 1.2e-08 | 34.2 | 0.6 | 630.0 | -1.2 |
| pfu_aug2.0_1109.1_31443.t1 | 5 | 2 | Coatomer_WDAD | 761 | 809 | 1.2e-08 | 34.2 | 0.6 | 630.0 | -1.2 |
| pfu_aug2.0_1109.1_31443.t1 | 5 | 3 | Coatomer_WDAD | 1048 | 1106 | 1.2e-08 | 34.2 | 5.5e-05 | 0.058 | 12.1 |
| pfu_aug2.0_1109.1_31443.t1 | 6 | 1 | Clathrin | 1056 | 1090 | 4.4e-06 | 26.3 | 0.0072 | 7.6 | 6.1 |
| pfu_aug2.0_1109.1_31443.t1 | 6 | 2 | Clathrin | 1136 | 1184 | 4.4e-06 | 26.3 | 0.1 | 110.0 | 2.3 |
| pfu_aug2.0_1109.1_31443.t1 | 8 | 1 | TPR_12 | 1160 | 1201 | 6.3e-06 | 26.0 | 9.2e-05 | 0.098 | 12.6 |
| pfu_aug2.0_1109.1_31443.t1 | 6 | 3 | Clathrin | 1215 | 1298 | 4.4e-06 | 26.3 | 0.00018 | 0.19 | 11.3 |
| pfu_aug2.0_1109.1_31443.t1 | 5 | 4 | Coatomer_WDAD | 1229 | 1370 | 1.2e-08 | 34.2 | 6.6e-07 | 0.0007 | 18.4 |
| pfu_aug2.0_1109.1_31443.t1 | 8 | 2 | TPR_12 | 1258 | 1279 | 6.3e-06 | 26.0 | 0.2 | 210.0 | 1.9 |
| pfu_aug2.0_1109.1_31443.t1 | 8 | 3 | TPR_12 | 1283 | 1310 | 6.3e-06 | 26.0 | 0.024 | 26.0 | 4.8 |
| pfu_aug2.0_1109.1_31443.t1 | 8 | 4 | TPR_12 | 1283 | 1313 | 6.3e-06 | 26.0 | 0.0036 | 3.8 | 7.5 |
| pfu_aug2.0_1109.1_31443.t1 | 6 | 4 | Clathrin | 1290 | 1326 | 4.4e-06 | 26.3 | 0.57 | 600.0 | -0.1 |
| pfu_aug2.0_1109.1_31443.t1 | 6 | 5 | Clathrin | 1345 | 1412 | 4.4e-06 | 26.3 | 0.015 | 16.0 | 5.0 |
| pfu_aug2.0_1109.1_31443.t1 | 8 | 5 | TPR_12 | 1361 | 1420 | 6.3e-06 | 26.0 | 0.0038 | 4.1 | 7.4 |
| pfu_aug2.0_1109.1_31443.t1 | 8 | 6 | TPR_12 | 1464 | 1489 | 6.3e-06 | 26.0 | 0.011 | 12.0 | 5.9 |
| pfu_aug2.0_1109.1_31443.t1 | 5 | 5 | Coatomer_WDAD | 1465 | 1515 | 1.2e-08 | 34.2 | 0.0058 | 6.1 | 5.5 |
| pfu_aug2.0_1109.1_31443.t1 | 6 | 6 | Clathrin | 1467 | 1528 | 4.4e-06 | 26.3 | 0.22 | 240.0 | 1.2 |
| pfu_aug2.0_1109.1_31443.t1 | 8 | 7 | TPR_12 | 1571 | 1586 | 6.3e-06 | 26.0 | 2.2 | 2300.0 | -1.5 |
| pfu_aug2.0_1109.1_31443.t1 | 8 | 8 | TPR_12 | 1651 | 1674 | 6.3e-06 | 26.0 | 3.9 | 4100.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1109.1_31443.t1 | gi|676496672|ref|XP_009067291.1| | hypothetical protein LOTGIDRAFT_223604 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1109.1_31443.t1 | gi|524916011|ref|XP_005112789.1| | PREDICTED: intraflagellar transport protein 140 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_1109.1_31443.t1 | gi|172355523|ref|NP_001116497.1| | intraflagellar transport protein 140 homolog [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_1109.1_31443.t1 | gi|395515786|ref|XP_003762080.1| | PREDICTED: intraflagellar transport protein 140 homolog [Sarcophilus harrisii] | 0.0 |
| pfu_aug2.0_1109.1_31443.t1 | gi|126335468|ref|XP_001364681.1| | PREDICTED: intraflagellar transport protein 140 homolog [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1109.1_31443.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1109.1_31443.t1 atggacaatttggaccaaaaaaatgatgctagactaaattccttagaggagaaaatgacccaaatggataaacgcctagg aacacgtatccaccaggaagtaaacaaaatgaaagccgatgtcaaaaatgaaatcacttcctccattctaacacacgtca aaaaggaaatcaaaacagaactaaaagaatatgacgataggaaaaatcaagttaacaatttagtcttgttcaatgttcca gaatctgaggttcacgataaagacgtgcgaaaaaaacatgacgaggatcattttgagaatctgatgtcaagtataatgga ggaaaaaatcgaaacaataacaatgttcaggattgggaagccaaatactggaaaaataagaccgctaaaagtgatattat cagaaaatgggaaaagaaagcaaattctacaaaatgccaaatttatatcacaaaaagcaccaacggatctcaaacgtgtg gtaatgaaaaaggactttactccacaacaaagagaagaacatcgggctagatttaatcgtgcacggataacacgtagtaa cgacagtctggagaacccaatgatgaatcgaacagtgcaacgaaaaccatcatttccagatatgtcgcccatcgcacatc attttgatgcaccattgtttcataatctcacccttttagatggggaggaaagccacgtaggcatgtcagttgcaagtaat caaaatgtatatcctgtaaataacgatagagtgatgttatcgggagaagaatgcaatgctactttaattcaagagataga cttgagtgctaccctaccttatggagggaacatgccacccggtaccaatgggtggatcatggctgtgtactttgaccatc gcctggacactgataggtctggcataaatactgatgtaagatggttcaaaggcagtcctatcctagcagtgacatcgtac agcgaggacacaggaggttctgtaaatctatacctggatgagggagagaagttaatgaatgttcagctcacacgtacctg ccaagcgactgccgtgtcatggcaccctacaaagaagatagtggctgttggatgggagaacggggaattgttagtatgga atgaagtggaccatgagctttttgaaggtttaccgctacataagacagctatcactgtattaggatggagctctaatggt actagactctcctctggtgataagtctggagtactgatggtatggaaagctgatgctaagggtcgactacagcagaatcc tctacatcaacatcatatacaggagcctctgtgccgtatgatgtatagaccactaccccctaatgatcatgccaagtcac taagtgaaaagggcaaaaataaaatgggcaaaattttccctgtatacagtggtgtttactatgtcaatgacagtggacag tgtacccagtgcttcagtgtagataatgctgtcatcaaactgctttattatgatgagaagaacattctgattacgataac ggagaacatgctgttaacgcaacattttattactccagagggtgatgccaaagaaatgatgaaggtgaaaatgagtggta gaggggagcagcccagtatagtatgggctgggaaaggaatcctagctacagccctgggagaaggggttgtaagaatgttg gacattgaccatgaagacaactacatcctgtccctggacggccatggaagctatgatcctaatgaaaacatcatgtgtct gtcatattcagaggataaaggagtgttggtaggagggaccaatatgggtaacattgccctgtggaaatatgcccctcccc ttggaggtaaacaggtagatggagagctcaaatggaagttacaaacacctgctactgtagagggacctataaggcagata gagtggggatcgaacaagaacctcttggctgttaatactatagccaatgtcttcattctgaatgagcaggttatgagctc tagctttggagaacagactgctgttgttcaatatggacccagttccttatctattgagatgttttccaatatggcacatc atgatctcaaaacggaaatccaggtcaagggcatctatactacaaaggaagctctggcagtgtggaatggaaggagagtt attacttatgaatattctgctgataaatccacaataaaagctgcaggaagcttcacaacagagactctgacagtgtgtct gtatgaacagaacgtgtattgtatagagcctggtaaagtccaagtaaggactcatcagggaacagtaaagcagacaataa attacacagagaatgaaggtcagccaacgtgtatggatgtgtgtggtaactatctggtagtggctacaagtcagggaatt gtacgggtttacgacttatctcgaagagaggctaagccacacagtcaacctaggaatctgggagaaatcattccaggatt tggtggcatcatgtctgtcaaatgtaattgtactggtaccagagtcagtgttcaaattaaaactcacaatggtcaaacag accctaaattatatttctgggatacagaagtggattctgtgtcatactttaactttgagagtggtagaggagagcaagat gacttccctccggaacagatagagggcgtggaaggggacacaaatgatgctgaaagaggtaaaaatcaagcagctaagga cattgcgggtagatatccagtgtcccattattgggatcaacatgaaccgaagctgattgtgtgtgaggctcgggtcctag ccagtgctgtacagaaaaaggtggaggaggacaagaaaaaacctccatcattatcaaagtctatggatgaaggaattgtt gagttcatggttgtttcattattcagtacaccagagaatggtatactaatccaggataacttctctctaccagaactgta tcaggctttattaggtgtagaagtaccatattattacttcatcaaaaagtcagagaacacccaggaagatgagaatacac cagataatgtgatcagaacagaaggtgtttctccgagaatggtagctcgtaaaactatgagagactttgttggtctggaa agcagtgataaagggacaaaagatgccatgttaaacttcagttattaccttactattggtaacatggatgaagcattcaa gtccataaaactgatcaaaagtgaatcagtatgggagaatatggcaaagatgtgtgtaaagagtcggagacttgatgtag ccagtgtatgcctgggtaatatgggacatgcccgtggggctaaggctctcagagaagctatgaaggaacctgagcttgat gctaaagtggcagtcctggccatgcagttaggattaaaggaggatgcagaaagacttttgaagaattgtaagagatatga tttgttaaatgagttttatcagtctgggggacagtggaagaaagcactagagacggcagagatgtacgacaggatacacc tcagaacgacgtattataactttgctaaacatctagagatgaaaggagaattatcagaagccataccaaactttgagaaa tccgatacacatagatttgaagttcccagaatgctatttgatgagccagaggcattggaaggttacatcagcagacataa agacaaagcactgcacaaatggtgggcacagtacatggagagtacaggagagatggagacagctttacagttctatgaga atgcccaggattatctgtccttagtcagagtttactgttactgtggacagatggataaggcagcagagatctgtaacgag acaggagacagagctgcttgttaccatttaggtcgacagtatgagaaccaggaccaaatcaaggaggccatacacttctt ccagagagctcaggcgtactttaatgccattagactctgcaaggagcatggttatgaggatcagctgatgaatctggcat tgatgggacgacctgaggacatgatagaggcagctcgttattatgaacagaaacccggagcgcaggacaaagctgtcatg ctctatcacaaggcaggaaatttctccaaggctttggacttgtctttccgagctcgtcagtttggtgctctccagttgat atctggggaattagacgagagggctgatcctgagttactaaaacgatgtggtgacttctttatggagaacggacagtacg acaaagctgtggatctactggccattggtaaaaagtactgggaggctctgaagatttgtatggaccagactgtagagata agtgaggacttggcagagaagctaacaccagacaaggacgagccgggtatagacactatggagagagtcaagattctaga ggccattgctgaggtctgcatgcaccaaggacagtatcatttagccaccaaaaagttcacccaggctggaaacaaaatca aggcgatgaaggcattgttgaaatctggtgacacagagaagattgtattctttgccggtgtatccagacagaaggaaatt tatgtaatggctgccaactacttacagtccctggactggagaaaagacccagaaatcatgaaaaatattataggcttcta tactaagggcagagccctggattcattagcaggcttctatgatgcttgtgctcaggtagaaatagatgagtaccagaact atgacaaagccttgggcgcgttaggtgaggcgtataaatgtctgagtaaagctaagatgggggatgagatgttacaagag gagaggttatcacagcttaaaaacaagatgaccctcgttaaaaagttcatcactgctagaagagcatatgatgagaatgc tgaggagggaatcaagcaatgtcaggtgttactagaggagccagacttagattctgctgtcagaattggggacgtgtacg ggctgatgatagaatactatgctcgcagggaaagatggaaggcggcttatgctgcattagaggagatgagaagtaagata ccccatgtgaatgtaggttattatgttaatatgaagacagtagaggctgtgcacaaagctttagacattccattaagtaa aacgatcacgtcgaagatgaacggagtgatgcaggatgaggaggatggagagattgtagaagaggaagtggacaatatat acggacaggatgatcttatttga |
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Protein
| Protein ID | pfu_aug2.0_1109.1_31443.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1109.1_31443.t1 MDNLDQKNDARLNSLEEKMTQMDKRLGTRIHQEVNKMKADVKNEITSSILTHVKKEIKTELKEYDDRKNQVNNLVLFNVP ESEVHDKDVRKKHDEDHFENLMSSIMEEKIETITMFRIGKPNTGKIRPLKVILSENGKRKQILQNAKFISQKAPTDLKRV VMKKDFTPQQREEHRARFNRARITRSNDSLENPMMNRTVQRKPSFPDMSPIAHHFDAPLFHNLTLLDGEESHVGMSVASN QNVYPVNNDRVMLSGEECNATLIQEIDLSATLPYGGNMPPGTNGWIMAVYFDHRLDTDRSGINTDVRWFKGSPILAVTSY SEDTGGSVNLYLDEGEKLMNVQLTRTCQATAVSWHPTKKIVAVGWENGELLVWNEVDHELFEGLPLHKTAITVLGWSSNG TRLSSGDKSGVLMVWKADAKGRLQQNPLHQHHIQEPLCRMMYRPLPPNDHAKSLSEKGKNKMGKIFPVYSGVYYVNDSGQ CTQCFSVDNAVIKLLYYDEKNILITITENMLLTQHFITPEGDAKEMMKVKMSGRGEQPSIVWAGKGILATALGEGVVRML DIDHEDNYILSLDGHGSYDPNENIMCLSYSEDKGVLVGGTNMGNIALWKYAPPLGGKQVDGELKWKLQTPATVEGPIRQI EWGSNKNLLAVNTIANVFILNEQVMSSSFGEQTAVVQYGPSSLSIEMFSNMAHHDLKTEIQVKGIYTTKEALAVWNGRRV ITYEYSADKSTIKAAGSFTTETLTVCLYEQNVYCIEPGKVQVRTHQGTVKQTINYTENEGQPTCMDVCGNYLVVATSQGI VRVYDLSRREAKPHSQPRNLGEIIPGFGGIMSVKCNCTGTRVSVQIKTHNGQTDPKLYFWDTEVDSVSYFNFESGRGEQD DFPPEQIEGVEGDTNDAERGKNQAAKDIAGRYPVSHYWDQHEPKLIVCEARVLASAVQKKVEEDKKKPPSLSKSMDEGIV EFMVVSLFSTPENGILIQDNFSLPELYQALLGVEVPYYYFIKKSENTQEDENTPDNVIRTEGVSPRMVARKTMRDFVGLE SSDKGTKDAMLNFSYYLTIGNMDEAFKSIKLIKSESVWENMAKMCVKSRRLDVASVCLGNMGHARGAKALREAMKEPELD AKVAVLAMQLGLKEDAERLLKNCKRYDLLNEFYQSGGQWKKALETAEMYDRIHLRTTYYNFAKHLEMKGELSEAIPNFEK SDTHRFEVPRMLFDEPEALEGYISRHKDKALHKWWAQYMESTGEMETALQFYENAQDYLSLVRVYCYCGQMDKAAEICNE TGDRAACYHLGRQYENQDQIKEAIHFFQRAQAYFNAIRLCKEHGYEDQLMNLALMGRPEDMIEAARYYEQKPGAQDKAVM LYHKAGNFSKALDLSFRARQFGALQLISGELDERADPELLKRCGDFFMENGQYDKAVDLLAIGKKYWEALKICMDQTVEI SEDLAEKLTPDKDEPGIDTMERVKILEAIAEVCMHQGQYHLATKKFTQAGNKIKAMKALLKSGDTEKIVFFAGVSRQKEI YVMAANYLQSLDWRKDPEIMKNIIGFYTKGRALDSLAGFYDACAQVEIDEYQNYDKALGALGEAYKCLSKAKMGDEMLQE ERLSQLKNKMTLVKKFITARRAYDENAEEGIKQCQVLLEEPDLDSAVRIGDVYGLMIEYYARRERWKAAYAALEEMRSKI PHVNVGYYVNMKTVEAVHKALDIPLSKTITSKMNGVMQDEEDGEIVEEEVDNIYGQDDLI |
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