Gene
| Gene Model ID | pfu_aug2.0_1109.1_31446 |
|---|---|
| Locus | scaffold1109.1 : 119566 ... 124835 : - |
| To GenomeBrowser | scaffold1109.1:119566..124835 |
| Genes list of scaffold | scaffold1109.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1109.1_31446.t1 | 1 | 1 | Complex1_LYR | 5 | 71 | 1.2e-14 | 53.8 | 4.1e-18 | 2.0e-14 | 53.0 |
| pfu_aug2.0_1109.1_31446.t1 | 1 | 1 | Complex1_LYR_1 | 5 | 71 | 4.7e-10 | 39.5 | 1.9e-13 | 9.3e-10 | 38.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1109.1_31446.t1 | gi|676436860|ref|XP_009048018.1| | hypothetical protein LOTGIDRAFT_212882 [Lottia gigantea] | 1.99993e-41 |
| pfu_aug2.0_1109.1_31446.t1 | gi|524872454|ref|XP_005092989.1| | PREDICTED: LYR motif-containing protein 1-like [Aplysia californica] | 5.0e-34 |
| pfu_aug2.0_1109.1_31446.t1 | gi|260801453|ref|XP_002595610.1| | hypothetical protein BRAFLDRAFT_200918 [Branchiostoma floridae] | 3.0e-33 |
| pfu_aug2.0_1109.1_31446.t1 | gi|548520063|ref|XP_005697632.1| | PREDICTED: LYR motif-containing protein 1 isoform X1 [Capra hircus] | 1.0e-32 |
| pfu_aug2.0_1109.1_31446.t1 | gi|426254411|ref|XP_004020872.1| | PREDICTED: LYR motif-containing protein 1 [Ovis aries] | 1.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_1109.1_31446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1109.1_31446.t1 atgtcactgagacaggaggcattgtctgtgtaccgcagggcattcagactggcgcgcacctggcagagcgtggggggtga ccaggaggagacactgacagagagggagtacatcaaggaggagacaaggaggctattccgaaaaaataagaatataacaa acgaggaagaaataaaagaacatctgagagaagctaacactagaatagagatggccatacactaccagataccttaccct agaatagttaacattccacagaatgtgttagcccccacgacagccaagttaaaacggagacagaaaagacagatagagga gtcaaaacctgtgtactggaagtcatacagtgattctgataaagacgataagacatga |
|
Protein
| Protein ID | pfu_aug2.0_1109.1_31446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1109.1_31446.t1 MSLRQEALSVYRRAFRLARTWQSVGGDQEETLTEREYIKEETRRLFRKNKNITNEEEIKEHLREANTRIEMAIHYQIPYP RIVNIPQNVLAPTTAKLKRRQKRQIEESKPVYWKSYSDSDKDDKT |
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