Gene
| Gene Model ID | pfu_aug2.0_1109.1_31448 |
|---|---|
| Locus | scaffold1109.1 : 135856 ... 145896 : + |
| To GenomeBrowser | scaffold1109.1:135856..145896 |
| Genes list of scaffold | scaffold1109.1 |
| Synonym | pfu_aug1.0_2637.1_30195 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1109.1_31448.t1 | 1 | 1 | Cullin_binding | 116 | 230 | 6.0e-33 | 113.4 | 1.2e-36 | 9.3e-33 | 112.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1109.1_31448.t1 | gi|524882814|ref|XP_005098043.1| | PREDICTED: DCN1-like protein 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1109.1_31448.t1 | gi|585694369|ref|XP_006821813.1| | PREDICTED: DCN1-like protein 3-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1109.1_31448.t1 | gi|642932050|ref|XP_008196838.1| | PREDICTED: DCN1-like protein 3 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1109.1_31448.t1 | gi|746842737|ref|XP_011051591.1| | PREDICTED: DCN1-like protein 3 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_1109.1_31448.t1 | gi|383852968|ref|XP_003701997.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1109.1_31448.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1109.1_31448.t1 atggcatccactcgacctggtttgtcctcagagaaaaagatgttcacaccttatccaaaactccctcctataaagaagca tagtaacggtgagagtaaaagattgtcgtttatatctcgagatgtttcagagactaagatacaagctctctttgaccaat acaaggatgcagaagaggacgctattcttgttgaaggaatagagagtttctgtcgtgatttggatgtaaatcctgatgat tttgtagtcctggtgctagcctggaaatttcaggcagagacaatgggtaggtttagtagacaagagtttcttaatggttg caaatcacttaaggcagactccattaagggaatacaatcaaaattccctgaacttttaaatgaggttaagaacaagcaga cgttcaaagatctgtatagatggacttacaagtttggattagaggttgacacaggacagaggactcttcccattgatatg gccataggcctgtggaaattagttttctctcagaaagaaccagttatattgcagcgttggcttgaatttctggaggaaca tccaagcatccgaggagtgcccaaagacacatgggatatgttccttaactttacagaacaagtaggggatgatctaagtt catatgatgacacggaggcgtggcctagcttgtttgatgattttgttgagtga |
|
Protein
| Protein ID | pfu_aug2.0_1109.1_31448.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1109.1_31448.t1 MASTRPGLSSEKKMFTPYPKLPPIKKHSNGESKRLSFISRDVSETKIQALFDQYKDAEEDAILVEGIESFCRDLDVNPDD FVVLVLAWKFQAETMGRFSRQEFLNGCKSLKADSIKGIQSKFPELLNEVKNKQTFKDLYRWTYKFGLEVDTGQRTLPIDM AIGLWKLVFSQKEPVILQRWLEFLEEHPSIRGVPKDTWDMFLNFTEQVGDDLSSYDDTEAWPSLFDDFVE |
|